RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 RANBP10Q6VN20 620 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 WDR36Q8NI36 951 aaKnown RBP16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 ART4Q93070 314 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 GRAMD1AQ96CP6 724 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 EID2BQ96D98 161 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 COX14Q96I36 57 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 OR2M4Q96R27 311 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 TSPYL1Q9H0U9 437 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 VIPAS39Q9H9C1 493 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 PKD2L2Q9NZM6 624 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 APPL1Q9UKG1 709 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 CNOT6Q9ULM6 557 aaKnown RBP16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 PCYT1BQ9Y5K3 369 aaPredicted RBP16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 OAS3Q9Y6K5 1087 aaKnown RBP16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 CCDC187A0A096LP49 1063 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 ESYT3A0FGR9 886 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 D6RAR5 112 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 MAP2K7O14733 419 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 DXOO77932 396 aaKnown RBP16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 TNFSF15O95150 251 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 PYGLP06737 847 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 TNFRSF8P28908 595 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 NPY2RP49146 381 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 INHBCP55103 352 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 ARL4CP56559 192 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 PCBP4P57723 403 aaKnown RBP16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 OR1D5P58170 312 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 PYCR3Q53H96 274 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 ANKRD22Q5VYY1 191 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 SPRED1Q7Z699 444 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 SPACA3Q8IXA5 215 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 PDIK1LQ8N165 341 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 ARL14Q8N4G2 192 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 SLC25A41Q8N5S1 370 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 EIF1ADQ8N9N8 165 aaKnown RBP16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 SCARF2Q96GP6 870 aaPredicted RBP16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 SLC46A1Q96NT5 459 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 ZFYVE1Q9HBF4 777 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 ARNT2Q9HBZ2 717 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 CASS4Q9NQ75 786 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 GRHL1Q9NZI5 618 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 BFARQ9NZS9 450 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 ZNHIT2Q9UHR6 403 aa16.85■□□□□ 0.29
PRPF40A-204ENST00000450303 TCRBV7S3A2A0A539 114 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 RHPN2P1A8MT19 583 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 GOLGA8MH3BSY2 632 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 B4GAT1O43505 415 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 NUDT21O43809 227 aaKnown RBP16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 PPFIA2O75334 1257 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 TMEM63AO94886 807 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 HGFP14210 728 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 PNLIPP16233 465 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 ALDH4A1P30038 563 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 ERVPABLB-1P60509 514 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 B4GALNT1Q00973 533 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 BIRC2Q13490 618 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 LAMB3Q13751 1172 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 AMZ1Q400G9 498 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 DNAJC21Q5F1R6 531 aaKnown RBP16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 SIRPB2Q5JXA9 342 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 ZNF648Q5T619 568 aaPredicted RBP16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 HENMT1Q5T8I9 393 aaKnown RBP16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 CHST15Q7LFX5 561 aaPredicted RBP16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 TMPRSS9Q7Z410 1059 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 C17orf82Q86X59 251 aaPredicted RBP16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 GALNT13Q8IUC8 556 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 NAGSQ8N159 534 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 GPR26Q8NDV2 337 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 ZNF248Q8NDW4 579 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 OR52K1Q8NGK4 314 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 APOL2Q9BQE5 337 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 GPR63Q9BZJ6 419 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 CDH19Q9H159 772 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 THSD1Q9NS62 852 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 HACD3Q9P035 362 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 ZNF711Q9Y462 761 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 SPO11Q9Y5K1 396 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 CACNA1GO43497 2377 aa16.84■□□□□ 0.29
PRPF40A-204ENST00000450303 AURKAO14965 403 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 DNAJC6O75061 913 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 CASP8Q14790 479 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 HIF1AQ16665 826 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 USP53Q70EK8 1073 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 CENPUQ71F23 418 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 RAB11FIP2Q7L804 512 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 TMC3Q7Z5M5 1100 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 RAVER1Q8IY67 606 aaKnown RBP16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 FBXO39Q8N4B4 442 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 GOLGA6L1Q8N7Z2 621 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 FBXO25Q8TCJ0 367 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 LIN37Q96GY3 246 aaPredicted RBP16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 SERPINB12Q96P63 405 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 FMO2Q99518 471 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 SPATA16Q9BXB7 569 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 STRADBQ9C0K7 418 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 RDH14Q9HBH5 336 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 MAGEE1Q9HCI5 957 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 PCDHGA8Q9Y5G5 932 aa16.83■□□□□ 0.28
PRPF40A-204ENST00000450303 RGSL1A5PLK6 1076 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms