RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 PCP4L1A6NKN8 68 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 FADS2P1A8MWK0 482 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 C1QTNF3-AMACRE9PGA6 284 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 IGFBP4P22692 258 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 RAB2AP61019 212 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 BNIP3Q12983 259 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 KCNA10Q16322 511 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 LBX2Q6XYB7 198 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 OR4L1Q8NH43 312 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 AASSQ9UDR5 926 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 DERAQ9Y315 318 aa13.8□□□□□ -0.2
ITGB4-202ENST00000449880 GLDCP23378 1020 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 C16orf59Q7L2K0 433 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 COMMD2Q86X83 199 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 SHISA4Q96DD7 197 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 OR2B2Q9GZK3 357 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 DNMT3LQ9UJW3 386 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 PRAMEF33A0A0G2JMD5 474 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 TNFRSF11BO00300 401 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 PRAMEF10O60809 474 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 ASMTP46597 345 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 CTBP1Q13363 440 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 SIM2Q14190 667 aaPredicted RBP13.79□□□□□ -0.2
ITGB4-202ENST00000449880 MYBPC3Q14896 1274 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 TCEAL1Q15170 157 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 TCEA2Q15560 299 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 MCCC1Q96RQ3 725 aaPredicted RBP13.79□□□□□ -0.2
ITGB4-202ENST00000449880 LGMNQ99538 433 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 PDGFDQ9GZP0 370 aaPredicted RBP13.79□□□□□ -0.2
ITGB4-202ENST00000449880 DSN1Q9H410 356 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 FAM149AA5PLN7 773 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 PIAS1O75925 651 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 SLC25A52Q3SY17 297 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 ERMP1Q7Z2K6 904 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 PM20D2Q8IYS1 436 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 EFHD2Q96C19 240 aaPredicted RBP13.79□□□□□ -0.2
ITGB4-202ENST00000449880 ZNF347Q96SE7 839 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 NIFKQ9BYG3 293 aaKnown RBP13.79□□□□□ -0.2
ITGB4-202ENST00000449880 TRIT1Q9H3H1 467 aaKnown RBP13.79□□□□□ -0.2
ITGB4-202ENST00000449880 ZDHHC6Q9H6R6 413 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 ASAH2Q9NR71 780 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 MED11Q9P086 117 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 PCDHGA3Q9Y5H0 932 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 LYVE1Q9Y5Y7 322 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 FABP12A6NFH5 140 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 CSH1P0DML2 217 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 CSH2P0DML3 217 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 GNAZP19086 355 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 ICAM3P32942 547 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 GNG2P59768 71 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 BRMS1LQ5PSV4 323 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 GALNT5Q7Z7M9 940 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 LAPTM4BQ86VI4 370 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 OR8H3Q8N146 312 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 ITPAQ9BY32 194 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 ZFP14Q9HCL3 533 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 SIX2Q9NPC8 291 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 CNOT11Q9UKZ1 510 aaKnown RBP13.79□□□□□ -0.2
ITGB4-202ENST00000449880 A6NHS1 94 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 ONECUT3O60422 494 aaPredicted RBP13.79□□□□□ -0.2
ITGB4-202ENST00000449880 ABCB7O75027 752 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 CYP11A1P05108 521 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 AMD1P17707 334 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 SFT2D3Q587I9 215 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 TMEM53Q6P2H8 277 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 ZNF517Q6ZMY9 492 aaPredicted RBP13.79□□□□□ -0.2
ITGB4-202ENST00000449880 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.79□□□□□ -0.2
ITGB4-202ENST00000449880 NEK6Q9HC98 313 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 PHF24Q9UPV7 400 aa13.79□□□□□ -0.2
ITGB4-202ENST00000449880 MAFBQ9Y5Q3 323 aaPredicted RBP13.79□□□□□ -0.2
ITGB4-202ENST00000449880 LRCH4O75427 683 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 BMP7P18075 431 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 BIKQ13323 160 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 ZNHIT3Q15649 155 aaPredicted RBP13.78□□□□□ -0.2
ITGB4-202ENST00000449880 ZNF181Q2M3W8 571 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 PLEKHG4Q58EX7 1191 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 PRAMEF19Q5SWL8 479 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 EEF1DP3Q658K8 133 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 TPGS1Q6ZTW0 290 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 NAT8LQ8N9F0 302 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 ISOC1Q96CN7 298 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 CSPG4P5Q96PW8 444 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 COPS4Q9BT78 406 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 PCDHB1Q9Y5F3 818 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 FAM234BA2RU67 622 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 METTL21EPA6NDL7 271 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 EI24O14681 340 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 DENRO43583 198 aaKnown RBP13.78□□□□□ -0.2
ITGB4-202ENST00000449880 UGT2B17O75795 530 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 SUZ12Q15022 739 aaKnown RBP13.78□□□□□ -0.2
ITGB4-202ENST00000449880 PTGES3Q15185 160 aaKnown RBP13.78□□□□□ -0.2
ITGB4-202ENST00000449880 SLC22A16Q86VW1 577 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 PARP8Q8N3A8 854 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 JOSD2Q8TAC2 188 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 C11orf24Q96F05 449 aaPredicted RBP13.78□□□□□ -0.2
ITGB4-202ENST00000449880 LRRC3Q9BY71 257 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 LRTM1Q9HBL6 345 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 GLOD4Q9HC38 313 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 FKBP14Q9NWM8 211 aa13.78□□□□□ -0.2
ITGB4-202ENST00000449880 UPB1Q9UBR1 384 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms