RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 PCDHB5Q9Y5E4 795 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 SNX5Q9Y5X3 404 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 HIDE1A8MVS5 230 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 ZBTB24O43167 697 aaPredicted RBP8.05□□□□□ -1.12
LINC00954-202ENST00000449086 RASAL1O95294 804 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 CHEK2O96017 543 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 HNRNPA1P09651 372 aaKnown RBP eCLIP8.05□□□□□ -1.12
LINC00954-202ENST00000449086 CPB1P15086 417 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 KCNA5P22460 613 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 BDNFP23560 247 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 OR1D2P34982 312 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 MAGEA12P43365 314 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 TUFMP49411 452 aaKnown RBP8.05□□□□□ -1.12
LINC00954-202ENST00000449086 BCAT1P54687 386 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 IFITM3Q01628 133 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 SELENBP1Q13228 472 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 AQP6Q13520 282 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 ATP6AP1Q15904 470 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 TBPL2Q6SJ96 375 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 CCDC81Q6ZN84 652 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 VASH1Q7L8A9 365 aaPredicted RBP8.05□□□□□ -1.12
LINC00954-202ENST00000449086 TMEM135Q86UB9 458 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 ITIH5Q86UX2 942 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 TMEM151AQ8N4L1 468 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 OR7A2PQ8NGA2 310 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 RDH11Q8TC12 318 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 B3GALT6Q96L58 329 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 CD320Q9NPF0 282 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 WDR70Q9NW82 654 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 ERVK-11Q9UQG0 969 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 RAD54BQ9Y620 910 aa8.05□□□□□ -1.12
LINC00954-202ENST00000449086 MTMR11A4FU01 709 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 TRIM64CA6NLI5 447 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 SYCE1LA8MT33 242 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 H3BMM5 538 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 DEAF1O75398 565 aaPredicted RBP8.04□□□□□ -1.12
LINC00954-202ENST00000449086 LMO2P25791 158 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 SULT1E1P49888 294 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 HK2P52789 917 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 TAS2R39P59534 338 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 RAB10P61026 200 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 TSTD2Q5T7W7 516 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 TMEM236Q5W0B7 351 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 RSPO2Q6UXX9 243 aaPredicted RBP8.04□□□□□ -1.12
LINC00954-202ENST00000449086 ANKRD13BQ86YJ7 626 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 PELI3Q8N2H9 469 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 DEFB123Q8N688 67 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 TRPV3Q8NET8 790 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 RNF139Q8WU17 664 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 VPS33AQ96AX1 596 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 TMEM74Q96NL1 305 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 DACH2Q96NX9 599 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 CDX2Q99626 313 aaPredicted RBP8.04□□□□□ -1.12
LINC00954-202ENST00000449086 C1QTNF1Q9BXJ1 281 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 ATXN3LQ9H3M9 355 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 RHOJQ9H4E5 214 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 CRTAC1Q9NQ79 661 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 ITM2CQ9NQX7 267 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.04□□□□□ -1.12
LINC00954-202ENST00000449086 COMMD8Q9NX08 183 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 PNMA8BQ9ULN7 279 aaPredicted RBP8.04□□□□□ -1.12
LINC00954-202ENST00000449086 NDUFAF1Q9Y375 327 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 PCDHGA3Q9Y5H0 932 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 DYTNA2CJ06 578 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 RFXAPO00287 272 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 JRKO75564 520 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 HOXB8P17481 243 aaPredicted RBP8.04□□□□□ -1.12
LINC00954-202ENST00000449086 NFKB1P19838 968 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 SHMT2P34897 504 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 NEK2P51955 445 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 PITX1P78337 314 aaPredicted RBP8.04□□□□□ -1.12
LINC00954-202ENST00000449086 IL1RL1Q01638 556 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 MEP1AQ16819 746 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 NEPROQ6NW34 567 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 LCLAT1Q6UWP7 414 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 TMC5Q6UXY8 1006 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 AKAP14Q86UN6 197 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 SPATA2LQ8IUW3 424 aaPredicted RBP8.04□□□□□ -1.12
LINC00954-202ENST00000449086 ADGRG5Q8IZF4 528 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 AUTS2Q8WXX7 1259 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 GUCD1Q96NT3 240 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 GPR22Q99680 433 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 KCTD14Q9BQ13 255 aaPredicted RBP8.04□□□□□ -1.12
LINC00954-202ENST00000449086 HGH1Q9BTY7 390 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 WDR12Q9GZL7 423 aaKnown RBP8.04□□□□□ -1.12
LINC00954-202ENST00000449086 ATP13A3Q9H7F0 1226 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 EML4Q9HC35 981 aaKnown RBP8.04□□□□□ -1.12
LINC00954-202ENST00000449086 EVLQ9UI08 416 aaPredicted RBP8.04□□□□□ -1.12
LINC00954-202ENST00000449086 ANAPC2Q9UJX6 822 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 USP22Q9UPT9 525 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 B3GNT3Q9Y2A9 372 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 ANKRD6Q9Y2G4 727 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 AQP12BA6NM10 295 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 HACD1B0YJ81 288 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 H0Y858 1186 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 ACOX3O15254 700 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 TGM5O43548 720 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 NOBOXO60393 691 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 SEC14L2O76054 403 aa8.04□□□□□ -1.12
LINC00954-202ENST00000449086 INMTO95050 263 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms