RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 KDELC1Q6UW63 502 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 ADAMTSL4Q6UY14 1074 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 NAGSQ8N159 534 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 AGBL5Q8NDL9 886 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 IPMKQ8NFU5 416 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 PIH1D2Q8WWB5 315 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 TADA1Q96BN2 335 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 RUNDC3BQ96NL0 473 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 APOL2Q9BQE5 337 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 RHOXF2Q9BQY4 288 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 NUDT22Q9BRQ3 303 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 SUDS3Q9H7L9 328 aaPredicted RBP13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 DMGDHQ9UI17 866 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 SNX24Q9Y343 169 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 SDK2Q58EX2 2172 aa13.61□□□□□ -0.23
PDLIM2-213ENST00000448520 TLN1Q9Y490 2541 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 EFCAB8A8MWE9 144 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 PPM1DO15297 605 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 FGF3P11487 239 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 CCL4P13236 92 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 ITGB6P18564 788 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 ACTR1BP42025 376 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 CHRNA4P43681 627 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 POLD2P49005 469 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 WNT3AP56704 352 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 ACTR1AP61163 376 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 PTSQ03393 145 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 SRSF6Q13247 344 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 LRP8Q14114 963 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 PTPRRQ15256 657 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 TBR1Q16650 682 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 TMEM71Q6P5X7 295 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 ZNF765Q7L2R6 523 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 PRICKLE2Q7Z3G6 844 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 VASH2Q86V25 355 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 NRSN1Q8IZ57 195 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 CPT1BQ92523 772 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 COL26A1Q96A83 441 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 AP2M1Q96CW1 435 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 OR2M4Q96R27 311 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 FICDQ9BVA6 458 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 ASPSCR1Q9BZE9 553 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 ABCG8Q9H221 673 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 PIH1D1Q9NWS0 290 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 FEZ2Q9UHY8 353 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 CHKBQ9Y259 395 aa13.6□□□□□ -0.23
PDLIM2-213ENST00000448520 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 IGHV1OR21-1A0A087WYE8 117 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 B4E171 279 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 FZD6O60353 706 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 ZNF189O75820 626 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 TMEM63AO94886 807 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 AGTP01019 485 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 PDHA1P08559 390 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 CTPS1P17812 591 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 TSPAN7P41732 249 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 GRIA1P42261 906 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 FASLGP48023 281 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 EPHB1P54762 984 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 SEMA5AQ13591 1074 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 GALNT3Q14435 633 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 NAA30Q147X3 362 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 PYCR3Q53H96 274 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 IZUMO3Q5VZ72 239 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 DUPD1Q68J44 220 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 KCTD11Q693B1 232 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 ATG14Q6ZNE5 492 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 SYDE1Q6ZW31 735 aaPredicted RBP13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 MAATS1Q7Z4T9 603 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 TSPAN33Q86UF1 283 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 SLC25A41Q8N5S1 370 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 RCBTB1Q8NDN9 531 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 NKD1Q969G9 470 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 AHCYL2Q96HN2 611 aaKnown RBP13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 MRGPRX2Q96LB1 330 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 CCDC74BQ96LY2 380 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 ERP44Q9BS26 406 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 DDA1Q9BW61 102 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 GEMIN8Q9NWZ8 242 aaKnown RBP13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 KCNK4Q9NYG8 393 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 PDP2Q9P2J9 529 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 IL17BQ9UHF5 180 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 FAM153AQ9UHL3 310 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 ST14Q9Y5Y6 855 aa13.59□□□□□ -0.23
PDLIM2-213ENST00000448520 A0A0J9YYE9 177 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 A0A0U1RQS6 177 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 E7EVH7 732 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 GOLGA8MH3BSY2 632 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 DNALI1O14645 258 aaPredicted RBP13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 TP73O15350 636 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 CAPN5O15484 640 aaPredicted RBP13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 SUV39H1O43463 412 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 SOD1P00441 154 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 PRLP01236 227 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 TRBC1P01850 177 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 APRTP07741 180 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 THRAP10827 490 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 CA4P22748 312 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 FDFT1P37268 417 aa13.58□□□□□ -0.24
PDLIM2-213ENST00000448520 GEMP55040 296 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms