RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 HLA-BQ31612 363 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 ZNF542PQ5EBM4 170 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 PRAMEF14Q5SWL7 426 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 UBAP2Q5T6F2 1119 aaKnown RBP7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 KCTD16Q68DU8 428 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 ZNF470Q6ECI4 717 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 DOK6Q6PKX4 331 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 IL27RAQ6UWB1 636 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 PACS1Q6VY07 963 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 PARGQ86W56 976 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 DENND6AQ8IWF6 608 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 CNTN4Q8IWV2 1026 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 OTUD6BQ8N6M0 293 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 C2CD4AQ8NCU7 369 aaPredicted RBP7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 MYRIPQ8NFW9 859 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 GABPB2Q8TAK5 448 aaPredicted RBP7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 FBF1Q8TES7 1133 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 AENQ8WTP8 325 aaKnown RBP7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 SCG3Q8WXD2 468 aaKnown RBP7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 OR1E3Q8WZA6 343 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 GLMNQ92990 594 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 TSACCQ96A04 125 aaPredicted RBP7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 SGF29Q96ES7 293 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 CCDC97Q96F63 343 aaPredicted RBP7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 DCUN1D1Q96GG9 259 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 FAM167BQ9BTA0 163 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 BOCQ9BWV1 1114 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 NUSAP1Q9BXS6 441 aaKnown RBP7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 ZDHHC5Q9C0B5 715 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 ZCCHC2Q9C0B9 1178 aaKnown RBP7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 CDC42EP4Q9H3Q1 356 aaKnown RBP7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 SMOC1Q9H4F8 434 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 RMI1Q9H9A7 625 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 CYP4F12Q9HCS2 524 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 FGF22Q9HCT0 170 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 MRPL40Q9NQ50 206 aaKnown RBP7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 FSCN3Q9NQT6 498 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 INTS10Q9NVR2 710 aaKnown RBP7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 KLQ9UEF7 1012 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 ZNHIT2Q9UHR6 403 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 FBXO5Q9UKT4 447 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 SUFUQ9UMX1 484 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 DGKBQ9Y6T7 804 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 FANCMQ8IYD8 2048 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 GPR179Q6PRD1 2367 aa7.45□□□□□ -1.22
AC004540.1-206ENST00000448056 FAM159BA6NKW6 160 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 CXorf49A8MYA2 514 aaPredicted RBP7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 PRMT5O14744 637 aaPredicted RBP7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 RIPK2O43353 540 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 GRID2O43424 1007 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 SGTAO43765 313 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 DFNA5O60443 496 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 LRP3O75074 770 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 PIAS1O75925 651 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 HAUS5O94927 633 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 AP2A2O94973 939 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 RASGRP1O95267 797 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 ACSL3O95573 720 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 TNFP01375 233 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 C1QAP02745 245 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 AHSGP02765 367 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 NME1P15531 152 aaKnown RBP7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 ZNF7P17097 686 aaPredicted RBP7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 ENGP17813 658 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 TGM1P22735 817 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 GABRB3P28472 473 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 AKT1P31749 480 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 STX2P32856 288 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 PHBP35232 272 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 NSG1P42857 185 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 SLC1A2P43004 574 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 LEPRP48357 1165 aaKnown RBP7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 RXRGP48443 463 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 BLKP51451 505 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 HK3P52790 923 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 ADARP55265 1226 aaKnown RBP7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 SPEM2Q0P670 501 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 GRIK2Q13002 908 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 GTF2H3Q13889 308 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 CSRP2Q16527 193 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 ZNF423Q2M1K9 1284 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 KBTBD12Q3ZCT8 623 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 PYCR3Q53H96 274 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 ZNF789Q5FWF6 425 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 RNF187Q5TA31 235 aaPredicted RBP7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 TCEAL6Q6IPX3 200 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 EMBQ6PCB8 327 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 TMEM220Q6QAJ8 160 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 KIAA0408Q6ZU52 694 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 MARK2Q7KZI7 788 aaKnown RBP7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 DET1Q7L5Y6 550 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 VASH1Q7L8A9 365 aaPredicted RBP7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 RD3Q7Z3Z2 195 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 GALNT7Q86SF2 657 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 LRRC6Q86X45 466 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 HID1Q8IV36 788 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 ZNF547Q8IVP9 402 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 RBFAQ8N0V3 343 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 CYP4X1Q8N118 509 aa7.44□□□□□ -1.22
AC004540.1-206ENST00000448056 CLDN19Q8N6F1 224 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms