RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 GCNT3O95395 438 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 MOCS2O96007 188 aaPredicted RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 ASS1P00966 412 aaKnown RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 FYNP06241 537 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 CAPN1P07384 714 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 KELP23276 732 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 ARCN1P48444 511 aaKnown RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 GFERP55789 205 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 ALCAMQ13740 583 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 KCNAB1Q14722 419 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 KRTAP24-1Q3LI83 254 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 CARD16Q5EG05 197 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 LRRC73Q5JTD7 316 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 ARHGAP17Q68EM7 881 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 SLC30A9Q6PML9 568 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 PAMR1Q6UXH9 720 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 TMC3Q7Z5M5 1100 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 PCDH20Q8N6Y1 951 aaKnown RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 ENDOVQ8N8Q3 282 aaKnown RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 DCAF4L2Q8NA75 395 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 ANKRD52Q8NB46 1076 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 PLEKHO2Q8TD55 490 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 DQX1Q8TE96 717 aaKnown RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 SLC37A2Q8TED4 501 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 RMND5BQ96G75 393 aaPredicted RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 BTN2A3PQ96KV6 586 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 SERPINB11Q96P15 392 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 WRAP53Q9BUR4 548 aaKnown RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 LGR4Q9BXB1 951 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 NLNQ9BYT8 704 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 PLA2G12AQ9BZM1 189 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.21□□□□□ -1.9
PMS1-215ENST00000447232 CNGB3Q9NQW8 809 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 TINAGQ9UJW2 476 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 EDARQ9UNE0 448 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 ZNF835Q9Y2P0 537 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 H7C1Q1 480 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 ENDOD1O94919 500 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 IFNA2P01563 188 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 PCCBP05166 539 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 HOXD4P09016 255 aaPredicted RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 MST1P26927 711 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 GKP32189 559 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 HOXD13P35453 343 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 GPS2Q13227 327 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 EIF4EBP2Q13542 120 aaPredicted RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 PEX6Q13608 980 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 PRKD1Q15139 912 aaPredicted RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 INAQ16352 499 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 SGSM1Q2NKQ1 1148 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 C5orf22Q49AR2 442 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 RABGAP1LQ5R372 815 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 SHEQ5VZ18 495 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 SPOPLQ6IQ16 392 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 LCN10Q6JVE6 187 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 FBXL22Q6P050 247 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 Q6ZPB1 254 aaPredicted RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 NCCRP1Q6ZVX7 275 aaPredicted RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 MRGPREQ86SM8 312 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 PLXDC1Q8IUK5 500 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 ZNF655Q8N720 491 aaPredicted RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 UBR7Q8N806 425 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 DNAAF3Q8N9W5 541 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 CLEC1AQ8NC01 280 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 C3orf20Q8ND61 904 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 PHF10Q8WUB8 498 aaKnown RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 KLHL6Q8WZ60 621 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 IRGQQ8WZA9 623 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 DNAJC19Q96DA6 116 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 FER1L6-AS2Q96M78 137 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 LRFN5Q96NI6 719 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 IPO9Q96P70 1041 aaKnown RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 POLDIP3Q9BY77 421 aaKnown RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 CHST8Q9H2A9 424 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 EPB41L1Q9H4G0 881 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 LRRC4Q9HBW1 653 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 SARS2Q9NP81 518 aaKnown RBP3.21□□□□□ -1.9
PMS1-215ENST00000447232 OGFRQ9NZT2 677 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 TBC1D7Q9P0N9 293 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 HS3ST4Q9Y661 456 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 NUP210LQ5VU65 1888 aa3.21□□□□□ -1.9
PMS1-215ENST00000447232 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.2□□□□□ -1.92e-12■■■■■ 45.1
PMS1-215ENST00000447232 TRIM49BA6NDI0 452 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 KCNU1A8MYU2 1149 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 THAP12O43422 761 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 NRDCO43847 1150 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 ZMPSTE24O75844 475 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 ZNF202O95125 648 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 CD160O95971 181 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 IGLV3-25P01717 112 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 LTFP02788 710 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 RAF1P04049 648 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 RPN1P04843 607 aaKnown RBP3.2□□□□□ -1.9
PMS1-215ENST00000447232 GAP43P17677 238 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 GJB2P29033 226 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 CASP4P49662 377 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 SERPINH1P50454 418 aaKnown RBP3.2□□□□□ -1.9
PMS1-215ENST00000447232 AP3M2P53677 418 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 CASP6P55212 293 aa3.2□□□□□ -1.9
PMS1-215ENST00000447232 PCBP3P57721 371 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms