RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	ZC3H15	Q8WU90	426 aa	Known RBP	12.42	□□□□□ -0.42
DDR1-238	ENST00000446312	SKA2	Q8WVK7	121 aa	Predicted RBP	12.42	□□□□□ -0.42
DDR1-238	ENST00000446312	CENPN	Q96H22	339 aa	Predicted RBP	12.42	□□□□□ -0.42
DDR1-238	ENST00000446312	FCRL5	Q96RD9	977 aa		12.42	□□□□□ -0.42
DDR1-238	ENST00000446312	EPB41L1	Q9H4G0	881 aa		12.42	□□□□□ -0.42
DDR1-238	ENST00000446312	NANOG	Q9H9S0	305 aa		12.42	□□□□□ -0.42
DDR1-238	ENST00000446312	ENTPD7	Q9NQZ7	604 aa		12.42	□□□□□ -0.42
DDR1-238	ENST00000446312	ATP11B	Q9Y2G3	1177 aa		12.42	□□□□□ -0.42
DDR1-238	ENST00000446312	GPR182	O15218	404 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	MTSS1	O43312	755 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	SNX2	O60749	519 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	GUCY1B2	O75343	617 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	ECI2	O75521	394 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	HSPA1A	P0DMV8	641 aa	Known RBP	12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	HSPA1B	P0DMV9	641 aa	Known RBP	12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	IRF1	P10914	325 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	HMOX2	P30519	316 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	PIGA	P37287	484 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	PNPLA4	P41247	253 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	SEPHS1	P49903	392 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	KPNA2	P52292	529 aa	Known RBP	12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	ZNF235	Q14590	738 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	HERC3	Q15034	1050 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	CYBRD1	Q53TN4	286 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	ARMC12	Q5T9G4	340 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	GCNT7	Q6ZNI0	430 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	GPR142	Q7Z601	462 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	PGBD5	Q8N414	524 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312		Q8N9G6	341 aa	Predicted RBP	12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	PNPT1	Q8TCS8	783 aa	Known RBP	12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	GIPC2	Q8TF65	315 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	SNX19	Q92543	992 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	UBE2F	Q969M7	185 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	ITPKC	Q96DU7	683 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	NSMCE2	Q96MF7	247 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	TINF2	Q9BSI4	451 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	FEM1A	Q9BSK4	669 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	CARS2	Q9HA77	564 aa	Known RBP	12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	TREX1	Q9NSU2	369 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	GDAP2	Q9NXN4	497 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	TTC34	A8MYJ7	566 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	NT5C1B-RDH14	C9J2C7	533 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	DFNA5	O60443	496 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	WARS	P23381	471 aa	Known RBP	12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	OR1E1	P30953	314 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	MTHFR	P42898	656 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	SPCS2	Q15005	226 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	ACAP2	Q15057	778 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	NDUFA5	Q16718	116 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	ATP6AP1L	Q52LC2	224 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	PAGE2B	Q5JRK9	111 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	C10orf120	Q5SQS8	335 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	OVOS1	Q6IE37	1185 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	TMC5	Q6UXY8	1006 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	BHLHA9	Q7RTU4	235 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	FAM126B	Q8IXS8	530 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	TTC30B	Q8N4P2	665 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	SPERT	Q8NA61	448 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	NOL6	Q9H6R4	1146 aa	Known RBP	12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	FARSB	Q9NSD9	589 aa	Known RBP	12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	NDUFS3	O75489	264 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	FTH1	P02794	183 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	PIM1	P11309	404 aa	Predicted RBP	12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	G6PD	P11413	515 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	SLC2A4	P14672	509 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	CD1D	P15813	335 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	CTPS1	P17812	591 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	HERVK_113	P63132	956 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	CRY1	Q16526	586 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	KYAT1	Q16773	422 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	ANKRD26P1	Q6NSI1	321 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	LPCAT1	Q8NF37	534 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	METTL6	Q8TCB7	284 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	HTRA1	Q92743	480 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	CSF3R	Q99062	836 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	RTP3	Q9BQQ7	232 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	MCMBP	Q9BTE3	642 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	C9orf16	Q9BUW7	83 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	ERVK-6	Q9BXR3	956 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	FAM105A	Q9NUU6	356 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	GMIP	Q9P107	970 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	HCST	Q9UBK5	93 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	POU2F3	Q9UKI9	436 aa		12.41	□□□□□ -0.42
DDR1-238	ENST00000446312	SLC12A8	A0AV02	714 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	ASPDH	A6ND91	283 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	PSMD11	O00231	422 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	IRAK2	O43187	625 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	TOMM70	O94826	608 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	CCNA2	P20248	432 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	IFNA8	P32881	189 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	CAPG	P40121	348 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	OPRL1	P41146	370 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	IL5RA	Q01344	420 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	DUSP28	Q4G0W2	176 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	MBOAT1	Q6ZNC8	495 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	TRPV3	Q8NET8	790 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	ITFG1	Q8TB96	612 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	EEF1AKMT1	Q8WVE0	214 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	GLMN	Q92990	594 aa		12.4	□□□□□ -0.42
DDR1-238	ENST00000446312	HIPK3	Q9H422	1215 aa		12.4	□□□□□ -0.42

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