RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 ZNF778Q96MU6 729 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 MRM3Q9HC36 420 aaKnown RBP17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 PRDM8Q9NQV8 689 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 SYBUQ9NX95 663 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 CLCA2Q9UQC9 943 aa17.18■□□□□ 0.34
SMARCAL1-209ENST00000444508 SPEGQ15772 3267 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 TRBV23OR9-2A0A075B6M9 112 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 KIR2DS5A0A0G2JLQ3 304 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 A0A0G2JNG1 304 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 FAM149AA5PLN7 773 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 KLHL33A6NCF5 533 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 OR51F1A6NGY5 319 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 PDZK1P1A8MUH7 402 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 KIR2DS3K7RE56 304 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 AVILO75366 819 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 MT-CO3P00414 261 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 GOT2P00505 430 aaKnown RBP17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 PRSS56P0CW18 603 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 ATP1B2P14415 290 aaPredicted RBP17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 PBLDP30039 288 aaPredicted RBP17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 FOXN2P32314 431 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 B4GALNT1Q00973 533 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 DHX34Q14147 1143 aaKnown RBP17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 KIR2DS5Q14953 304 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 DBN1Q16643 649 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 BCL7AQ4VC05 210 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 FASTKD1Q53R41 847 aaKnown RBP17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 IYDQ6PHW0 289 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 CCNI2Q6ZMN8 369 aaPredicted RBP17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 SLC9B2Q86UD5 537 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 CAND1Q86VP6 1230 aaKnown RBP17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 JAMLQ86YT9 394 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 CCNJLQ8IV13 435 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 PIANPQ8IYJ0 282 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 SFRP1Q8N474 314 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 NAT8LQ8N9F0 302 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 AVL9Q8NBF6 648 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 SLC37A2Q8TED4 501 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 SERPINB12Q96P63 405 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 DEPDC7Q96QD5 511 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 KRT12Q99456 494 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 KIFC1Q9BW19 673 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 RABGEF1Q9UJ41 708 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 ANAPC5Q9UJX4 755 aa17.17■□□□□ 0.34
SMARCAL1-209ENST00000444508 AKAP13Q12802 2813 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 IGLV3-16A0A075B6K0 115 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 A6NCN8 305 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 SDR42E2A6NKP2 422 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 DNALI1O14645 258 aaPredicted RBP17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 TCEA3O75764 348 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 EML2O95834 649 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 RPLP0P05388 317 aaKnown RBP17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 PPARGP37231 505 aaPredicted RBP17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 SPIDRQ14159 915 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 ITIH4Q14624 930 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 SEPT7Q16181 437 aaKnown RBP17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 AARS2Q5JTZ9 985 aaKnown RBP17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 RNASEH2BQ5TBB1 312 aaKnown RBP17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 CDCP2Q5VXM1 449 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 IZUMO3Q5VZ72 239 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 CERS6Q6ZMG9 384 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 RBM44Q6ZP01 1051 aaKnown RBP17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 MICALCLQ6ZW33 695 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 CACTIN-AS1Q8N1I8 211 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 BEND7Q8N7W2 519 aaPredicted RBP17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 DCBLD1Q8N8Z6 715 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 GFM1Q96RP9 751 aaKnown RBP17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 VPS37BQ9H9H4 285 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 TREX1Q9NSU2 369 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 SOX13Q9UN79 622 aa17.16■□□□□ 0.34
SMARCAL1-209ENST00000444508 MAGEB16A2A368 324 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 MGAT4DA6NG13 374 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 TTI1O43156 1089 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 RPL10P27635 214 aaKnown RBP17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 NMBRP28336 390 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 HALP42357 657 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 NSG1P42857 185 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 GPR3P46089 330 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 FASLGP48023 281 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 PRLHRP49683 370 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 DRG2P55039 364 aaKnown RBP17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 CCL7P80098 99 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 HHEXQ03014 270 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 DMPKQ09013 629 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 TARDBPQ13148 414 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 AGAP9Q5VTM2 703 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 WASH2PQ6VEQ5 465 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 ZNF438Q7Z4V0 828 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 SPRED1Q7Z699 444 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 HOOK3Q86VS8 718 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 MARCH9Q86YJ5 346 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 TRIM48Q8IWZ4 208 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 SPATA4Q8NEY3 305 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 OR2L2Q8NH16 312 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 NAT14Q8WUY8 206 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 SH3KBP1Q96B97 665 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 CCDC97Q96F63 343 aaPredicted RBP17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 SGSM3Q96HU1 749 aa17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 LINC00615Q96LM1 132 aaPredicted RBP17.15■□□□□ 0.34
SMARCAL1-209ENST00000444508 LRRN3Q9H3W5 708 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms