RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 PACS2Q86VP3 889 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 LKAAEAR1Q8TD35 194 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 INPP5DQ92835 1189 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 PTERQ96BW5 349 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 ARHGEF3Q9NR81 526 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 SPATS2LQ9NUQ6 558 aaKnown RBP9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 OXSMQ9NWU1 459 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 FBXL21Q9UKT6 434 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 ANKRD12Q6UB98 2062 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 TCRBV21S2A2A0A5A6 115 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 TARM1B6A8C7 271 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 F8W8V4 182 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 BTN3A1O00481 513 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 MAGEC1O60732 1142 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 TRIM13O60858 407 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 SBK3P0C264 359 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 RGS4P49798 205 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 RPS21P63220 83 aaKnown RBP9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 ZP2Q05996 745 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 DPTQ07507 201 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 ASPHQ12797 758 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 SFSWAPQ12872 951 aaKnown RBP9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 CRY1Q16526 586 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 LIPMQ5VYY2 423 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 SEL1L3Q68CR1 1132 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 TMEM92Q6UXU6 159 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 Q6ZS52 159 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 ZBTB2Q8N680 514 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 FLCNQ8NFG4 579 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 EEF1AKMT1Q8WVE0 214 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 EXT2Q93063 718 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 GRAMD1AQ96CP6 724 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 MRGPRX1Q96LB2 322 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 ZCCHC2Q9C0B9 1178 aaKnown RBP9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 CD248Q9HCU0 757 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 TSR3Q9UJK0 312 aaKnown RBP9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 SORCS3Q9UPU3 1222 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 NCKAP1Q9Y2A7 1128 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 A0A0C4DFX4 3053 aa9.38□□□□□ -0.91
SMPD4P1-203ENST00000443839 PLRG1O43660 514 aaKnown RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 DLX3O60479 287 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 H2AFYO75367 372 aaKnown RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 AP2A2O94973 939 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TSPAN12O95859 305 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 SOD1P00441 154 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 NDUFV2P19404 249 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 DGKAP23743 735 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 ATP5F1P24539 256 aaPredicted RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 ADPRHP54922 357 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 PRKCQQ04759 706 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 OVGP1Q12889 678 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 SGCGQ13326 291 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 KHDC1Q4VXA5 237 aaKnown RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 ZNF648Q5T619 568 aaPredicted RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 SPATA21Q7Z572 469 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 YTHDF3Q7Z739 585 aaKnown RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 FAM124AQ86V42 546 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 KBTBD6Q86V97 674 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 CACNA2D3Q8IZS8 1091 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 PELI3Q8N2H9 469 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 RHEBL1Q8TAI7 183 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 STAG3L4Q8TBR4 150 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 KIAA1191Q96A73 305 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 CCDC126Q96EE4 140 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TFB2MQ9H5Q4 396 aaKnown RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 CYP4F12Q9HCS2 524 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 THAP1Q9NVV9 213 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 KCTD5Q9NXV2 234 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 FZD4Q9ULV1 537 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 RNF112Q9ULX5 631 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 MRPS17Q9Y2R5 130 aaKnown RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TBC1D3DA0A087WVF3 549 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TBC1D3IA0A087WXS9 549 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TBC1D3EA0A087X179 549 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TBC1D3KA0A087X1G2 549 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 NPEPPSL1A6NEC2 478 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TBC1D3FA6NER0 549 aaPredicted RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 NEMP2A6NFY4 417 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 OR2AG2A6NM03 316 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TBC1D3LB9A6J9 549 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 QSOX1O00391 747 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 KERAO60938 352 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 SMIM24O75264 130 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 FTH1P02794 183 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 PCCBP05166 539 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TBC1D3HP0C7X1 549 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TROVE2P10155 538 aaKnown RBP eCLIP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 SLC1A6P48664 564 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 PRKAA2P54646 552 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TMEM115Q12893 351 aaPredicted RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 BOP1Q14137 746 aaKnown RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 LRRC32Q14392 662 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 UBXN2BQ14CS0 331 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 OR4D1Q15615 310 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TSNQ15631 228 aaKnown RBP9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 CES4AQ5XG92 561 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TBC1D3GQ6DHY5 549 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 TBC1D3CQ6IPX1 549 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 KIAA1161Q6NSJ0 714 aa9.37□□□□□ -0.91
SMPD4P1-203ENST00000443839 NAPRTQ6XQN6 538 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms