RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 HERVK_113P63132 956 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 TEKQ02763 1124 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 POU5F1BQ06416 359 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CDC20Q12834 499 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ADAM15Q13444 863 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SLC12A1Q13621 1099 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 RAPSNQ13702 412 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 NFYCQ13952 458 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SIM2Q14190 667 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 FGL2Q14314 439 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SEC23AQ15436 765 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 USF2Q15853 346 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 PAN3Q58A45 887 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 HECTD3Q5T447 861 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 LGSNQ5TDP6 509 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 VWA5B1Q5TIE3 1220 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ATF7IP2Q5U623 682 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PDPK2PQ6A1A2 396 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CYB5R2Q6BCY4 276 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 KLHL17Q6TDP4 642 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 HHIPL2Q6UWX4 724 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SPATC1Q76KD6 591 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 STRA8Q7Z7C7 330 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CHERPQ8IWX8 916 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 DSELQ8IZU8 1212 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 LGI2Q8N0V4 545 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CELF2-AS1Q8N7Q2 184 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.76□□□□□ -1.97
LIG4-203ENST00000442234 KBTBD3Q8NAB2 608 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 EXOSC8Q96B26 276 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 NSUN4Q96CB9 384 aaKnown RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 CALML4Q96GE6 196 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 EXOC2Q96KP1 924 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 HS6ST2Q96MM7 605 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SLC13A1Q9BZW2 595 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ZYG11BQ9C0D3 744 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ACTR6Q9GZN1 396 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 C1orf21Q9H246 121 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 KCTD10Q9H3F6 313 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 RIBC2Q9H4K1 309 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 FAM96AQ9H5X1 160 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CYP3A43Q9HB55 503 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 OSGEPQ9NPF4 335 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 BLOC1S4Q9NUP1 217 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PPP1R14DQ9NXH3 145 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 B3GNT2Q9NY97 397 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.76□□□□□ -1.97
LIG4-203ENST00000442234 MAD2L2Q9UI95 211 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MID2Q9UJV3 735 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 NUDT5Q9UKK9 219 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 ACSL5Q9ULC5 683 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SORCS3Q9UPU3 1222 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 MGAT4BQ9UQ53 548 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 PCDHA1Q9Y5I3 950 aa2.76□□□□□ -1.97
LIG4-203ENST00000442234 SCN9AQ15858 1988 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 SETD2Q9BYW2 2564 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 MYO10Q9HD67 2058 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 UTYO14607 1347 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 FREM2Q5SZK8 3169 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 MED19A0JLT2 244 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 C9IYK1 514 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ANKRD63C9JTQ0 380 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 DFFAO00273 331 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 EML1O00423 815 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TRIM38O00635 465 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 SLC30A4O14863 429 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 GRM6O15303 877 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TMEM127O75204 238 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 SNX4O95219 450 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 STAU1O95793 577 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 AGR2O95994 175 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 INHBBP09529 407 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 SLC2A3P11169 496 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 CYP2A6P11509 494 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 SELLP14151 372 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ZNF250P15622 560 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TCF3P15923 654 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 CKMT2P17540 419 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 PTPN1P18031 435 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 PSMB9P28065 219 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 EPHA3P29320 983 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 CD52P31358 61 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 CAPGP40121 348 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 GARSP41250 739 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 ASMTP46597 345 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 OR1G1P47890 313 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 INPP1P49441 399 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 NAPAP54920 295 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TXNL4AP83876 142 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 GHRHRQ02643 423 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 SPEM2Q0P670 501 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 DGCR6Q14129 220 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 DRAP1Q14919 205 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 NUMA1Q14980 2115 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 EMC2Q15006 297 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ACOX1Q15067 660 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 NCF4Q15080 339 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 PLCL1Q15111 1095 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ANGPT1Q15389 498 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 CCDC142Q17RM4 750 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms