RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 ZNF613Q6PF04 617 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 PACS2Q86VP3 889 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 LINC00471Q8N535 108 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 SMG7Q92540 1137 aaKnown RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 ART4Q93070 314 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 MCMBPQ9BTE3 642 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 PCDH18Q9HCL0 1135 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 SMPD3Q9NY59 655 aaPredicted RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 EGFL7Q9UHF1 273 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 ILVBLA1L0T0 632 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 GSC2O15499 205 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 SPAM1P38567 509 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 MRPS5P82675 430 aaKnown RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 PPP3CAQ08209 521 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 C15orf59Q2T9L4 293 aaPredicted RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 INAVAQ3KP66 663 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 NBPF12Q5TAG4 269 aaPredicted RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 CXorf57Q6NSI4 855 aaKnown RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 DENND1AQ8TEH3 1009 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 ACO2Q99798 780 aaKnown RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 ANKRA2Q9H9E1 313 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 PDP1Q9P0J1 537 aaPredicted RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 ZNF282Q9UDV7 671 aaPredicted RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 MED31Q9Y3C7 131 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 ALG5Q9Y673 324 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 TLL2Q9Y6L7 1015 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 PRORSD1PA6NEY8 169 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 TNFRSF10BO14763 440 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 NDST3O95803 873 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 AUHQ13825 339 aaKnown RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 DPY19L1Q2PZI1 675 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 FAM151BQ6UXP7 276 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 SIX5Q8N196 739 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 FAM47BQ8NA70 645 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 KCTD4Q8WVF5 259 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 XAGE5Q8WWM1 108 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 RAB11FIP5Q9BXF6 653 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 PCDHB16Q9NRJ7 776 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 DIP2AQ14689 1571 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 SLC22A2O15244 555 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 CSDE1O75534 798 aaKnown RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 CALCAP01258 141 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 FSHRP23945 695 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 EPHA3P29320 983 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 CACNG1Q06432 222 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 ZNF155Q12901 538 aaPredicted RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 UBAP2LQ14157 1087 aaKnown RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 LLGL2Q6P1M3 1020 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 SLC30A10Q6XR72 485 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 CACUL1Q86Y37 369 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 GALNT13Q8IUC8 556 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 OR8H1Q8NGG4 311 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 C9orf43Q8TAL5 461 aaPredicted RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 CLPTM1LQ96KA5 538 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 AP1S3Q96PC3 154 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 TPK1Q9H3S4 243 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 EHD1Q9H4M9 534 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 SERINC1Q9NRX5 453 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 BTRCQ9Y297 605 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 KCNIP3Q9Y2W7 256 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 PLLPQ9Y342 182 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 NRXN1Q9ULB1 1477 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 NME6O75414 186 aaPredicted RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 SCELO95171 688 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 IFNA21P01568 189 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 LINGO3P0C6S8 592 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 SLC6A4P31645 630 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 CASRP41180 1078 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 AVPR1BP47901 424 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 APLP1P51693 650 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 GBX2P52951 348 aaPredicted RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 SMAD3P84022 425 aaKnown RBP6.62□□□□□ -1.35
USP46-201ENST00000441222 PCDH1Q08174 1060 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 PIGZQ86VD9 579 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 OR2AJ1Q8NGZ0 328 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 NODALQ96S42 347 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 POLLQ9UGP5 575 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 PCDHGB6Q9Y5F9 930 aa6.62□□□□□ -1.35
USP46-201ENST00000441222 hCG_1818297A0A087WSY0 165 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 DUXAA6NLW8 204 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 ALOX15BO15296 676 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 FADS2O95864 444 aaKnown RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 DBIP07108 87 aaKnown RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 CYP4B1P13584 511 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 PKMP14618 531 aaKnown RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 GOT1P17174 413 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 GPR158Q5T848 1215 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 USP43Q70EL4 1123 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CUZD1Q86UP6 607 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CRYBG2Q8N1P7 616 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 HHATLQ9HCP6 504 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 MYH14Q7Z406 1995 aaKnown RBP6.61□□□□□ -1.35
USP46-201ENST00000441222 CYP3A7-CYP3A51PA0A087WV96 503 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 LRRC10BA6NIK2 292 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CLDN25C9JDP6 229 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 ZBTB22O15209 634 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 GLUD1P00367 558 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 IFNA7P01567 189 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CYP3A7P24462 503 aa6.61□□□□□ -1.35
USP46-201ENST00000441222 CCNFP41002 786 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms