RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 CCDC149Q6ZUS6 474 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 EIF3MQ7L2H7 374 aaKnown RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 SYT12Q8IV01 421 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 CADM3Q8N126 398 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 TTLQ8NG68 377 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 DNAJB8Q8NHS0 232 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 FBXO27Q8NI29 283 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 KCTD15Q96SI1 283 aaPredicted RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 ZSCAN5AQ9BUG6 496 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 SENP6Q9GZR1 1112 aaPredicted RBP6.33□□□□□ -1.4
BDNF-211ENST00000439476 UNC93B1Q9H1C4 597 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 CXorf21Q9HAI6 301 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 C12orf10Q9HB07 376 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 CHRAC1Q9NRG0 131 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 ADAMTS6Q9UKP5 1117 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 SPATA2Q9UM82 520 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 ENTPD4Q9Y227 616 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 PCDHGA11Q9Y5H2 935 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 PTPRJQ12913 1337 aa6.33□□□□□ -1.4
BDNF-211ENST00000439476 TRPM3Q9HCF6 1732 aaPredicted RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 XIRP1Q702N8 1843 aaKnown RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 CCDC88AQ3V6T2 1871 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 PIPSLA2A3N6 862 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 COL1A2P08123 1366 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 APEHP13798 732 aaKnown RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 TMEM11P17152 192 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 PTX3P26022 381 aaPredicted RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 GPD2P43304 727 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 ASPAP45381 313 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 ZNF157P51786 506 aaPredicted RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 RHAGQ02094 409 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 MAPKAPK3Q16644 382 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 IL23RQ5VWK5 629 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 MBLAC2Q68D91 279 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 ZYG11AQ6WRX3 759 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 RALGPS2Q86X27 583 aaPredicted RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 CCDC28AQ8IWP9 274 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 CBR4Q8N4T8 237 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 C10orf53Q8N6V4 93 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 TIFAQ96CG3 184 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 DHRS9Q9BPW9 319 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 BTBD2Q9BX70 525 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 ULBP1Q9BZM6 244 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 C6orf62Q9GZU0 229 aaPredicted RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 PLK2Q9NYY3 685 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 TRPC4Q9UBN4 977 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 OR12D3Q9UGF7 316 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 CYTH4Q9UIA0 394 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 FBXO5Q9UKT4 447 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 ERGIC3Q9Y282 383 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 TRPV2Q9Y5S1 764 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 MRPL42Q9Y6G3 142 aaKnown RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 NRCAMQ92823 1304 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 A8MU76 341 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 CBX4O00257 560 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 NBNO60934 754 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 LDOC1O95751 146 aaPredicted RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 GCAP28676 217 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 IDUAP35475 653 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 NDUFAF6Q330K2 333 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 FAM209BQ5JX69 171 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 PGM2L1Q6PCE3 622 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 ERI1Q8IV48 349 aaKnown RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 CCDC116Q8IYX3 515 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 KIAA0319LQ8IZA0 1049 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 OR2T34Q8NGX1 318 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 OR2T3Q8NH03 318 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 ZNF566Q969W8 418 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 NXNL1Q96CM4 212 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 SIGLEC10Q96LC7 697 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 AGAP2Q99490 1192 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 PKP2Q99959 881 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 TKTL2Q9H0I9 626 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 PCDHAC1Q9H158 963 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 RIBC2Q9H4K1 309 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 RPRD1BQ9NQG5 326 aaKnown RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 STARD7Q9NQZ5 370 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 DTLQ9NZJ0 730 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 COQ3Q9NZJ6 369 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 KCNN3Q9UGI6 736 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 ERVK-19Q9WJR5 959 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 FAM149AA5PLN7 773 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 CAPN14A8MX76 684 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 STX16-NPEPL1H3BU86 382 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 TSPAN4O14817 238 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 UGT2B11O75310 529 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 ULK1O75385 1050 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 MFN2O95140 757 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 SEC24AO95486 1093 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 ZNF16P17020 682 aaPredicted RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 ALOX12P18054 663 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 POLR2CP19387 275 aaPredicted RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 GTF2E2P29084 291 aaKnown RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 GSTM5P46439 218 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 CDK9P50750 372 aaKnown RBP6.32□□□□□ -1.4
BDNF-211ENST00000439476 SLC5A3P53794 718 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 PNLIPRP1P54315 467 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 PLCL1Q15111 1095 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 PFKFB4Q16877 469 aa6.32□□□□□ -1.4
BDNF-211ENST00000439476 KIAA1614Q5VZ46 1190 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms