RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 NT5MQ9NPB1 228 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 SLC52A3Q9NQ40 469 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 PLSCR3Q9NRY6 295 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.25□□□□□ -0.295e-7■■■■□ 22.3
ACTN1-204ENST00000438964 GALPQ9UBC7 116 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 TRHDEQ9UKU6 1024 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 PSME4Q14997 1843 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 LOC100506127A0A0U1RQW1 187 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 LOC100130705A0A1B0GUX0 176 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 BBIP1A8MTZ0 92 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 PRMT5O14744 637 aaPredicted RBP13.25□□□□□ -0.29
ACTN1-204ENST00000438964 RAD51BO15315 384 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 PRKD3O94806 890 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 PGLSO95336 258 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 CYP2C8P10632 490 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 NPR3P17342 541 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 PCMT1P22061 227 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 CD86P42081 329 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 CAMK2BQ13554 666 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 NPTX1Q15818 432 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 P2RY8Q86VZ1 359 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 COLGALT2Q8IYK4 626 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 CLHC1Q8NHS4 586 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 MCFD2Q8NI22 146 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 BPIFB1Q8TDL5 484 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 STON2Q8WXE9 905 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 UBXN10Q96LJ8 280 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 CYP2S1Q96SQ9 504 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 BEX2Q9BXY8 128 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 XIRP2A4UGR9 3374 aa13.25□□□□□ -0.29
ACTN1-204ENST00000438964 C16orf96A6NNT2 1141 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 TTC34A8MYJ7 566 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 CDC7O00311 574 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 ANGPTL1O95841 491 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 CHRNA1P02708 482 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 MT-ND2P03891 347 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 FMO4P31512 558 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 CCR1P32246 355 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 ZFP36L2P47974 494 aaKnown RBP13.24□□□□□ -0.29
ACTN1-204ENST00000438964 IHHQ14623 411 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 TSNQ15631 228 aaKnown RBP13.24□□□□□ -0.29
ACTN1-204ENST00000438964 HIST2H2ACQ16777 129 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-204ENST00000438964 DGUOKQ16854 277 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 ATP6AP1LQ52LC2 224 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 PRMT9Q6P2P2 845 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 MICU2Q8IYU8 434 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 PNPT1Q8TCS8 783 aaKnown RBP13.24□□□□□ -0.29
ACTN1-204ENST00000438964 BLOC1S5Q8TDH9 187 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.24□□□□□ -0.291e-6■■■■■ 31.4
ACTN1-204ENST00000438964 REXO4Q9GZR2 422 aaKnown RBP13.24□□□□□ -0.29
ACTN1-204ENST00000438964 DSN1Q9H410 356 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 TREX1Q9NSU2 369 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 SUN2Q9UH99 717 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 FBXW11Q9UKB1 542 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 ITGB1BP2Q9UKP3 347 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 ZNF646O15015 1829 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-204ENST00000438964 MYO1GB0I1T2 1018 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 H0YAE9 185 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 RFPL2O75678 378 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 CYP7B1O75881 506 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 CCNKO75909 580 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 RECQL5O94762 991 aaPredicted RBP13.24□□□□□ -0.29
ACTN1-204ENST00000438964 MTHFD2P13995 350 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 CYP4F2P78329 520 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 PHC1P78364 1004 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 CYP4F3Q08477 520 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 VAC14Q08AM6 782 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 GTF2H3Q13889 308 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 FSCN1Q16658 493 aaKnown RBP13.24□□□□□ -0.29
ACTN1-204ENST00000438964 PPP2R2DQ66LE6 453 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 ZNF549Q6P9A3 640 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 SLC22A9Q8IVM8 553 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 CNTN4Q8IWV2 1026 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 RIMKLAQ8IXN7 391 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 NLGN4XQ8N0W4 816 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 ZFP42Q96MM3 310 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 DUSP16Q9BY84 665 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 MAGEE1Q9HCI5 957 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 ADPRHL2Q9NX46 363 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 ADGRE2Q9UHX3 823 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 ARL5AQ9Y689 179 aa13.24□□□□□ -0.29
ACTN1-204ENST00000438964 MYBPHLA2RUH7 354 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 C1QCP02747 245 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 GSNP06396 782 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 PAMP19021 973 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 DSC2Q02487 901 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 SEMA3BQ13214 749 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 TUBA3CQ13748 450 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 SEMA3AQ14563 771 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 FAM98BQ52LJ0 330 aaKnown RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 FAM209AQ5JX71 171 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 VARS2Q5ST30 1063 aaKnown RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 AHSA2Q719I0 299 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 CILP2Q8IUL8 1156 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 LYSMD2Q8IV50 215 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 FAM126BQ8IXS8 530 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 BEST2Q8NFU1 509 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 HDAC2Q92769 488 aaKnown RBP13.23□□□□□ -0.29
ACTN1-204ENST00000438964 CCDC126Q96EE4 140 aa13.23□□□□□ -0.29
ACTN1-204ENST00000438964 BTBD2Q9BX70 525 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms