RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 CSE1LP55060 971 aaKnown RBP6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 NFATC2Q13469 925 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 TMED2Q15363 201 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 ELOA3BQ3SY89 546 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 TTC31Q49AM3 519 aaPredicted RBP6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 GPR33Q49SQ1 333 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 ATP13A5Q4VNC0 1218 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 ZRANB3Q5FWF4 1079 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 TMEM31Q5JXX7 168 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 HENMT1Q5T8I9 393 aaKnown RBP6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 RNF187Q5TA31 235 aaPredicted RBP6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 MROH9Q5TGP6 573 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 AGBL2Q5U5Z8 902 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 KCTD16Q68DU8 428 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 ANO7Q6IWH7 933 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 ZNF549Q6P9A3 640 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 CNSTQ6PJW8 725 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 TIFABQ6ZNK6 161 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 SH2D5Q6ZV89 423 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 ZNF765Q7L2R6 523 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 TAS2R42Q7RTR8 314 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 SNX20Q7Z614 316 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 GALNT7Q86SF2 657 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 SDCCAG8Q86SQ7 713 aaPredicted RBP6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 TRABD2AQ86V40 505 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 FAM124AQ86V42 546 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 KBTBD6Q86V97 674 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 EXOC3L1Q86VI1 746 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 SERPINA9Q86WD7 417 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 NRSN1Q8IZ57 195 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 PELI3Q8N2H9 469 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 TRAM1L1Q8N609 369 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 OTUD6BQ8N6M0 293 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 CELF2-AS1Q8N7Q2 184 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 TSTD1Q8NFU3 115 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 ELOA3Q8NG57 546 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 OR14C36Q8NHC7 312 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 CXorf40AQ8TE69 158 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 LPGAT1Q92604 370 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 ATXN7L3BQ96GX2 97 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 SERAC1Q96JX3 654 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 ATP6V1G3Q96LB4 118 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 BRINP2Q9C0B6 783 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 CDH19Q9H159 772 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 RHOJQ9H4E5 214 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 ASB8Q9H765 288 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 RAD18Q9NS91 495 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 NSMCE4AQ9NXX6 385 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 BCCIPQ9P287 314 aaKnown RBP eCLIP6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 TXNDC16Q9P2K2 825 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 GMPR2Q9P2T1 348 aaKnown RBP6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 KLF15Q9UIH9 416 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 NCKAP1Q9Y2A7 1128 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 MTO1Q9Y2Z2 717 aaKnown RBP6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 PCDHB14Q9Y5E9 798 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 IKBKGQ9Y6K9 419 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 SLC30A1Q9Y6M5 507 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 MYOFQ9NZM1 2061 aa6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 TCF20Q9UGU0 1960 aaKnown RBP6.97□□□□□ -1.29
LSM3P3-201ENST00000436601 TBC1D3DA0A087WVF3 549 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 TBC1D3IA0A087WXS9 549 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 TBC1D3EA0A087X179 549 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 TBC1D3KA0A087X1G2 549 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 IQANK1A0A1B0GTG1 560 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 A0A1W2PQU0 124 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 TBC1D3FA6NER0 549 aaPredicted RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 GOLGA6L10A6NI86 522 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 TBC1D3LB9A6J9 549 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 TRIM49D1C9J1S8 452 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 K7ESF4 209 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 K7ESM1 405 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 RAD51BO15315 384 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 PDPK1O15530 556 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 DCXO43602 365 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 OR1I1O60431 355 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 RNGTTO60942 597 aaKnown RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 NDUFS3O75489 264 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 RFPL1O75677 317 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 RGS9O75916 674 aaPredicted RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 KRT37O76014 449 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 KRT38O76015 456 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 TM7SF2O76062 418 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 APBB3O95704 486 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 PAK4O96013 591 aaPredicted RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 ALDOAP04075 364 aaKnown RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 SNRPAP09012 282 aaKnown RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 TBC1D3HP0C7X1 549 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 CREB1P16220 341 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 ITGALP20701 1170 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 EPHA1P21709 976 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 ALAS2P22557 587 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 ACRV1P26436 265 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 CNTFP26441 200 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 PMLP29590 882 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 SPRP35270 261 aaPredicted RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 PTGER3P43115 390 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 PXNP49023 591 aaPredicted RBP6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 ARL4DP49703 201 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 CSRP3P50461 194 aa6.96□□□□□ -1.3
LSM3P3-201ENST00000436601 PGGT1BP53609 377 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms