RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 RFX6Q8HWS3 928 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 GLOD4Q9HC38 313 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 SLC40A1Q9NP59 571 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 WASH6PQ9NQA3 447 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 ANKMY1Q9P2S6 941 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 TRIM10Q9UDY6 481 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 KCND3Q9UK17 655 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 TP53TG5Q9Y2B4 290 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 SPO11Q9Y5K1 396 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.43■□□□□ 0.062e-6■■■□□ 15.7
CALD1-208ENST00000435928 KCNMB2Q9Y691 235 aa15.43■□□□□ 0.06
CALD1-208ENST00000435928 AURKAO14965 403 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 KIF1CO43896 1103 aaKnown RBP15.42■□□□□ 0.06
CALD1-208ENST00000435928 PMPCBO75439 489 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 KATNA1O75449 491 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 TPM3P06753 285 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 CCNYL3P0C7X3 344 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 FGF5P12034 268 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 HALP42357 657 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 KLRB1Q12918 225 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 UBAP2LQ14157 1087 aaKnown RBP15.42■□□□□ 0.06
CALD1-208ENST00000435928 ERV3-1Q14264 604 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 ATP13A5Q4VNC0 1218 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 B4GALNT4Q76KP1 1039 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 PPP1R3BQ86XI6 285 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 SLC35G2Q8TBE7 412 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 TTC25Q96NG3 672 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 XPO4Q9C0E2 1151 aaKnown RBP15.42■□□□□ 0.06
CALD1-208ENST00000435928 BPIFA1Q9NP55 256 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 UBP1Q9NZI7 540 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 POLHQ9Y253 713 aa15.42■□□□□ 0.06
CALD1-208ENST00000435928 GOLGA6L3A6NEY3 463 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 MKRN2OSH3BPM6 223 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 AKR1B10O60218 316 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 SPAG6O75602 509 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 MT-ND3P03897 115 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 NELFEP18615 380 aaKnown RBP15.41■□□□□ 0.06
CALD1-208ENST00000435928 PTPN3P26045 913 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 HMGCLP35914 325 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 ARHGAP25P42331 645 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 TNNT3P45378 269 aaPredicted RBP15.41■□□□□ 0.06
CALD1-208ENST00000435928 TMEM115Q12893 351 aaPredicted RBP15.41■□□□□ 0.06
CALD1-208ENST00000435928 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.41■□□□□ 0.06
CALD1-208ENST00000435928 TEX44Q53QW1 395 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 C11orf96Q7Z7L8 435 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 BRSK1Q8TDC3 778 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 KLHL6Q8WZ60 621 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 ANP32EQ9BTT0 268 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 ZCCHC2Q9C0B9 1178 aaKnown RBP15.41■□□□□ 0.06
CALD1-208ENST00000435928 RAB33BQ9H082 229 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 PDE7BQ9NP56 450 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 EPHA6Q9UF33 1036 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 TMPRSS11EQ9UL52 423 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 WDR37Q9Y2I8 494 aa15.41■□□□□ 0.06
CALD1-208ENST00000435928 SSU72P8A0A1W2PR75 194 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 CDC14CA4D256 554 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 RFPL1O75677 317 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 FURINP09958 794 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 NR1D1P20393 614 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 PPP1CAP62136 330 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 TUBB3Q13509 450 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 DNASE1L3Q13609 305 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 PRKD1Q15139 912 aaPredicted RBP15.4■□□□□ 0.06
CALD1-208ENST00000435928 NOMO1Q15155 1222 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 ASTE1Q2TB18 679 aaPredicted RBP15.4■□□□□ 0.06
CALD1-208ENST00000435928 LRRC38Q5VT99 294 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 ZDHHC20Q5W0Z9 365 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 TCTN3Q6NUS6 607 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 KLHL35Q6PF15 583 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 AMZ2Q86W34 360 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 RHOT2Q8IXI1 618 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 SIDT2Q8NBJ9 832 aaKnown RBP15.4■□□□□ 0.06
CALD1-208ENST00000435928 GPR150Q8NGU9 434 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 UBXN4Q92575 508 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 RNF25Q96BH1 459 aaPredicted RBP15.4■□□□□ 0.06
CALD1-208ENST00000435928 TEKT5Q96M29 485 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 DNAJC7Q99615 494 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 TWSG1Q9GZX9 223 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 TRABDQ9H4I3 376 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 ZNHIT6Q9NWK9 470 aaKnown RBP15.4■□□□□ 0.06
CALD1-208ENST00000435928 DDX56Q9NY93 547 aaKnown RBP15.4■□□□□ 0.06
CALD1-208ENST00000435928 FAM153AQ9UHL3 310 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 PADI1Q9ULC6 663 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 PLAAQ9Y263 795 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 PCDHGA6Q9Y5G7 932 aa15.4■□□□□ 0.06
CALD1-208ENST00000435928 UTP20O75691 2785 aaKnown RBP15.4■□□□□ 0.06
CALD1-208ENST00000435928 PIPSLA2A3N6 862 aa15.39■□□□□ 0.05
CALD1-208ENST00000435928 KCNJ13O60928 360 aa15.39■□□□□ 0.05
CALD1-208ENST00000435928 CREG1O75629 220 aa15.39■□□□□ 0.05
CALD1-208ENST00000435928 TNNT1P13805 278 aa15.39■□□□□ 0.05
CALD1-208ENST00000435928 FECHP22830 423 aa15.39■□□□□ 0.05
CALD1-208ENST00000435928 SPAM1P38567 509 aa15.39■□□□□ 0.05
CALD1-208ENST00000435928 PMS2P54278 862 aa15.39■□□□□ 0.05
CALD1-208ENST00000435928 DMPKQ09013 629 aa15.39■□□□□ 0.05
CALD1-208ENST00000435928 TRIM14Q14142 442 aa15.39■□□□□ 0.05
CALD1-208ENST00000435928 PLCL1Q15111 1095 aa15.39■□□□□ 0.05
CALD1-208ENST00000435928 PPP2R5EQ16537 467 aa15.39■□□□□ 0.05
CALD1-208ENST00000435928 FAM151BQ6UXP7 276 aa15.39■□□□□ 0.05
CALD1-208ENST00000435928 BZW1Q7L1Q6 419 aaKnown RBP15.39■□□□□ 0.05
CALD1-208ENST00000435928 RHOT1Q8IXI2 618 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms