RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SERPINB2P05120 415 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 LDHCP07864 332 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 SNRNP70P08621 437 aaKnown RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 FAM106CPP0CH98 169 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 NR2F1P10589 423 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 G6PDP11413 515 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 PORP16435 677 aaPredicted RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 EDN2P20800 178 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 S1PR1P21453 382 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 KCNA5P22460 613 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 CBLP22681 906 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 EEF1DP29692 281 aaKnown RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 AHRP35869 848 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 EIF2DP41214 584 aaKnown RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 RFX5P48382 616 aaPredicted RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 NR2C2P49116 596 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 PDLIM4P50479 330 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 DLX5P56178 289 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 CEBPZQ03701 1054 aaKnown RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 CXCL9Q07325 125 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 PRPF4BQ13523 1007 aaKnown RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 MEP1AQ16819 746 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 ZNF718Q3SXZ3 478 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 ZNF672Q499Z4 452 aaPredicted RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 PDSS1Q5T2R2 415 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 MFSD4BQ5TF39 518 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 C9orf57Q5W0N0 161 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 C18orf63Q68DL7 685 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 WDR73Q6P4I2 378 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.09□□□□□ -2.07
CDC40-204ENST00000431461 CFAP77Q6ZQR2 320 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 TUBA1AQ71U36 451 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 SDCCAG8Q86SQ7 713 aaPredicted RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 DNAAF5Q86Y56 855 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 GPALPP1Q8IXQ4 340 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.09□□□□□ -2.07
CDC40-204ENST00000431461 CCDC13Q8IYE1 715 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 C17orf53Q8N3J3 647 aaPredicted RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 SLC5A8Q8N695 610 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 CCDC89Q8N998 374 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 AVL9Q8NBF6 648 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 APPL2Q8NEU8 664 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 GSDMBQ8TAX9 411 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 KCNG4Q8TDN1 519 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 SECTM1Q8WVN6 248 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 TMED6Q8WW62 240 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 TAF15Q92804 592 aaKnown RBP eCLIP2.09□□□□□ -2.07
CDC40-204ENST00000431461 MTERF3Q96E29 417 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 ARSGQ96EG1 525 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 PERPQ96FX8 193 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 SCMH1Q96GD3 660 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 WDFY2Q96P53 400 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 INPP4AQ96PE3 977 aaPredicted RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 NEK1Q96PY6 1258 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 BARD1Q99728 777 aaKnown RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 SEMA3CQ99985 751 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 TUBA1CQ9BQE3 449 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 SYT17Q9BSW7 474 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 C1QTNF4Q9BXJ3 329 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 SPATC1LQ9H0A9 340 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 RAD21L1Q9H4I0 556 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 DDX31Q9H8H2 851 aaKnown RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 CHMP1AQ9HD42 196 aaPredicted RBP2.09□□□□□ -2.07
CDC40-204ENST00000431461 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.09□□□□□ -2.07
CDC40-204ENST00000431461 TCP11L1Q9NUJ3 509 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 ABCF3Q9NUQ8 709 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 SETD4Q9NVD3 440 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 NKIRAS2Q9NYR9 191 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 TBC1D29Q9UFV1 150 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 PADI1Q9ULC6 663 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 ZNF148Q9UQR1 794 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 KLHL20Q9Y2M5 609 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 YIPF1Q9Y548 306 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 CLIC4Q9Y696 253 aa2.09□□□□□ -2.07
CDC40-204ENST00000431461 A0A1W2PQ09 198 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 MED19A0JLT2 244 aaPredicted RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 LNP1A1A4G5 178 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 FAM172BPA6NC97 362 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 TMEM8BA6NDV4 472 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 HNRNPCL2B2RXH8 293 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 FAM72CH0Y354 149 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 SNAP23O00161 211 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 MID1O15344 667 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 ZNHIT1O43257 154 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 ZBTB43O43298 467 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 FIBPO43427 364 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 SYNGR3O43761 229 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 GFPT2O94808 682 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 KDM4BO94953 1096 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 ZBTB11O95625 1053 aaPredicted RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 CAVIN2O95810 425 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 TBX6O95947 436 aaPredicted RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 ICAM1P05362 532 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 H1F0P07305 194 aaKnown RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 SP1P08047 785 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 ABCB1P08183 1280 aaPredicted RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 CSF2RAP15509 400 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 BDNFP23560 247 aa2.08□□□□□ -2.08
CDC40-204ENST00000431461 EEF1B2P24534 225 aaKnown RBP2.08□□□□□ -2.08
CDC40-204ENST00000431461 GCH1P30793 250 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms