RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 HDAC10Q969S8 669 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 SNF8Q96H20 258 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 WDR92Q96MX6 357 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 PWWP2AQ96N64 755 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 SERPINB12Q96P63 405 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 VPS35Q96QK1 796 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 ZSCAN5AQ9BUG6 496 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 CARD6Q9BX69 1037 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 IL22Q9GZX6 179 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 TCEAL2Q9H3H9 227 aaPredicted RBP7.34□□□□□ -1.23
LINC01049-201ENST00000426840 WDR26Q9H7D7 661 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 SUDS3Q9H7L9 328 aaPredicted RBP7.34□□□□□ -1.23
LINC01049-201ENST00000426840 L2HGDHQ9H9P8 463 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 MRM3Q9HC36 420 aaKnown RBP7.34□□□□□ -1.23
LINC01049-201ENST00000426840 TRIM39Q9HCM9 518 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 XAB2Q9HCS7 855 aaKnown RBP7.34□□□□□ -1.23
LINC01049-201ENST00000426840 FGF22Q9HCT0 170 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 TMEM9BQ9NQ34 198 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 MRPL40Q9NQ50 206 aaKnown RBP7.34□□□□□ -1.23
LINC01049-201ENST00000426840 PHPT1Q9NRX4 125 aaPredicted RBP7.34□□□□□ -1.23
LINC01049-201ENST00000426840 TM7SF3Q9NS93 570 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 TREX1Q9NSU2 369 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 SYBUQ9NX95 663 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 GRHL1Q9NZI5 618 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 ANAPC5Q9UJX4 755 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 APPL1Q9UKG1 709 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 SLC17A4Q9Y2C5 497 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 TMEM98Q9Y2Y6 226 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 DGKBQ9Y6T7 804 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 GVINP1Q7Z2Y8 2422 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 VPS13AQ96RL7 3174 aa7.34□□□□□ -1.23
LINC01049-201ENST00000426840 TP53BP1Q12888 1972 aaPredicted RBP7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PLXNB3Q9ULL4 1909 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PCNX2A6NKB5 2137 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 TRBV5-4A0A0C4DH59 114 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 MAGEB16A2A368 324 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 CCDC162PA2VCL2 907 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 GPR39O43194 453 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PCDHGA12O60330 932 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 DNAJC6O75061 913 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PIAS2O75928 621 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 SRP72O76094 671 aaKnown RBP7.33□□□□□ -1.24
LINC01049-201ENST00000426840 SLC25A14O95258 325 aaPredicted RBP7.33□□□□□ -1.24
LINC01049-201ENST00000426840 RASGRP1O95267 797 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 CER1O95813 267 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 TNFP01375 233 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 IVLP07476 585 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PRSS56P0CW18 603 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 GIMD1P0DJR0 217 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 NME1P15531 152 aaKnown RBP7.33□□□□□ -1.24
LINC01049-201ENST00000426840 DGKAP23743 735 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 CDKN1CP49918 316 aaPredicted RBP7.33□□□□□ -1.24
LINC01049-201ENST00000426840 HK3P52790 923 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 ATXN3P54252 364 aaPredicted RBP7.33□□□□□ -1.24
LINC01049-201ENST00000426840 ARHGAP8P85298 464 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 SLC7A5Q01650 507 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 SLC14A1Q13336 389 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 C1orf61Q13536 156 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PYCR3Q53H96 274 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 ARMC3Q5W041 872 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 CES3Q6UWW8 571 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 NLRP9Q7RTR0 991 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 RD3Q7Z3Z2 195 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 SNX20Q7Z614 316 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 ADGRG6Q86SQ4 1221 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 TMEM135Q86UB9 458 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PARGQ86W56 976 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 GATAD2AQ86YP4 633 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 IGDCC3Q8IVU1 814 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PIANPQ8IYJ0 282 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PHACTR4Q8IZ21 702 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 RBFAQ8N0V3 343 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 SLC25A45Q8N413 288 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 CEP112Q8N8E3 955 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PNPLA1Q8N8W4 532 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PPHLN1Q8NEY8 458 aaKnown RBP7.33□□□□□ -1.24
LINC01049-201ENST00000426840 SAP25Q8TEE9 199 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 SEC14L1Q92503 715 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PDXPQ96GD0 296 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 SGSM3Q96HU1 749 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 NSUN5Q96P11 429 aaKnown RBP7.33□□□□□ -1.24
LINC01049-201ENST00000426840 FCRL3Q96P31 734 aaPredicted RBP7.33□□□□□ -1.24
LINC01049-201ENST00000426840 TRIM56Q9BRZ2 755 aaKnown RBP7.33□□□□□ -1.24
LINC01049-201ENST00000426840 CLPBQ9H078 707 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 DPH5Q9H2P9 285 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 FAM96AQ9H5X1 160 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 ASB8Q9H765 288 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 CYP4F12Q9HCS2 524 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 ARFGAP3Q9NP61 516 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 SMOXQ9NWM0 555 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 UCKL1Q9NWZ5 548 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 DNAJC28Q9NX36 388 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 WHRNQ9P202 907 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 VPS18Q9P253 973 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 ATXN10Q9UBB4 475 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 KLQ9UEF7 1012 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 SOX13Q9UN79 622 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PCDHGB2Q9Y5G2 931 aa7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PCYT1BQ9Y5K3 369 aaPredicted RBP7.33□□□□□ -1.24
LINC01049-201ENST00000426840 PIEZO1Q92508 2521 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms