RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 F7P08709 466 aaPredicted RBP17.3■□□□□ 0.36
LINC00271-201ENST00000421378 ADARP55265 1226 aaKnown RBP17.3■□□□□ 0.36
LINC00271-201ENST00000421378 HNRNPKP61978 463 aaKnown RBP eCLIP17.3■□□□□ 0.36
LINC00271-201ENST00000421378 ZNF423Q2M1K9 1284 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 KBTBD12Q3ZCT8 623 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 PYCR3Q53H96 274 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 ZNF547Q8IVP9 402 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 MYRIPQ8NFW9 859 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 OR2M4Q96R27 311 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 TCEAL2Q9H3H9 227 aaPredicted RBP17.3■□□□□ 0.36
LINC00271-201ENST00000421378 SMYD2Q9NRG4 433 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 NSMCE4AQ9NXX6 385 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 CRYL1Q9Y2S2 319 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 GPSM3Q9Y4H4 160 aa17.3■□□□□ 0.36
LINC00271-201ENST00000421378 QSOX1O00391 747 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 CTIFO43310 598 aaKnown RBP17.29■□□□□ 0.36
LINC00271-201ENST00000421378 AP2A2O94973 939 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 C1QAP02745 245 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 CTSEP14091 401 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 LEPRP48357 1165 aaKnown RBP17.29■□□□□ 0.36
LINC00271-201ENST00000421378 PRLHRP49683 370 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 EIF3BP55884 814 aaKnown RBP17.29■□□□□ 0.36
LINC00271-201ENST00000421378 MAP9Q49MG5 647 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 BCL7AQ4VC05 210 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 PRRT3Q5FWE3 981 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 ZNF789Q5FWF6 425 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 TMEM220Q6QAJ8 160 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 ASCL5Q7RTU5 278 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 GALNT7Q86SF2 657 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 SLC26A11Q86WA9 606 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 LRRC6Q86X45 466 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 CTAGE3PQ8IX95 158 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 DCLK2Q8N568 766 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 MINDY1Q8N5J2 469 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 LRRC61Q9BV99 259 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 FUT8Q9BYC5 575 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 ACSS3Q9H6R3 686 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 PARD6AQ9NPB6 346 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 TRNAU1APQ9NX07 287 aaKnown RBP17.29■□□□□ 0.36
LINC00271-201ENST00000421378 TXNDC16Q9P2K2 825 aa17.29■□□□□ 0.36
LINC00271-201ENST00000421378 A0A087WUV0 522 aaPredicted RBP17.28■□□□□ 0.36
LINC00271-201ENST00000421378 A0A1B0GTQ1 180 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 CXorf49A8MYA2 514 aaPredicted RBP17.28■□□□□ 0.36
LINC00271-201ENST00000421378 F8W8V4 182 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 KMOO15229 486 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 YKT6O15498 198 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 SGTAO43765 313 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 ABHD2P08910 425 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 OR56A5P0C7T3 313 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 RPS3P23396 243 aaKnown RBP eCLIP17.28■□□□□ 0.36
LINC00271-201ENST00000421378 RXRGP48443 463 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 CCT8P50990 548 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 LRP8Q14114 963 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 TCEA2Q15560 299 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 PLA2G4EQ3MJ16 856 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 CHST15Q7LFX5 561 aaPredicted RBP17.28■□□□□ 0.36
LINC00271-201ENST00000421378 BEND7Q8N7W2 519 aaPredicted RBP17.28■□□□□ 0.36
LINC00271-201ENST00000421378 OR2I1PQ8NGU4 316 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 UBLCP1Q8WVY7 318 aaPredicted RBP17.28■□□□□ 0.36
LINC00271-201ENST00000421378 CAVIN3Q969G5 261 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 CYTH2Q99418 400 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 TMEM168Q9H0V1 697 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 P2RY12Q9H244 342 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 CAAP1Q9H8G2 361 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 IL21RQ9HBE5 538 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 TM7SF3Q9NS93 570 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 RABGEF1Q9UJ41 708 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 GNPTGQ9UJJ9 305 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 PCDHB1Q9Y5F3 818 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 PSAT1Q9Y617 370 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 PRSS21Q9Y6M0 314 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 FOXD2O60548 495 aaPredicted RBP17.28■□□□□ 0.36
LINC00271-201ENST00000421378 SDC3O75056 442 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 PIAS2O75928 621 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 HAUS5O94927 633 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 AHSGP02765 367 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 ESR1P03372 595 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 ACP5P13686 325 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 EPHA8P29322 1005 aaPredicted RBP17.28■□□□□ 0.36
LINC00271-201ENST00000421378 IL9RQ01113 521 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 ILF3Q12906 894 aaKnown RBP eCLIP17.28■□□□□ 0.36
LINC00271-201ENST00000421378 EFTUD2Q15029 972 aaKnown RBP eCLIP17.28■□□□□ 0.36
LINC00271-201ENST00000421378 INSCQ1MX18 579 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 PTRHD1Q6GMV3 140 aaKnown RBP17.28■□□□□ 0.36
LINC00271-201ENST00000421378 CNSTQ6PJW8 725 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 PRR23CQ6ZRP0 262 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 STRA8Q7Z7C7 330 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 C11orf96Q7Z7L8 435 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 PPM1NQ8N819 430 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 ZNF548Q8NEK5 533 aaPredicted RBP17.28■□□□□ 0.36
LINC00271-201ENST00000421378 BIRC8Q96P09 236 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 EDEM2Q9BV94 578 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 CCDC68Q9H2F9 335 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 SPASTQ9UBP0 616 aa17.28■□□□□ 0.36
LINC00271-201ENST00000421378 FTH1P02794 183 aa17.27■□□□□ 0.35
LINC00271-201ENST00000421378 TGM1P22735 817 aa17.27■□□□□ 0.35
LINC00271-201ENST00000421378 GABRB3P28472 473 aa17.27■□□□□ 0.35
LINC00271-201ENST00000421378 FMO4P31512 558 aa17.27■□□□□ 0.35
LINC00271-201ENST00000421378 CD151P48509 253 aa17.27■□□□□ 0.35
LINC00271-201ENST00000421378 NAB1Q13506 487 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 460.5 ms