RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 COX14Q96I36 57 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 VPS39Q96JC1 886 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 ORAI3Q9BRQ5 295 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 BOCQ9BWV1 1114 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 GSDMCQ9BYG8 508 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 ZDHHC5Q9C0B5 715 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 FGF22Q9HCT0 170 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 MRPL40Q9NQ50 206 aaKnown RBP8.36□□□□□ -1.07
TRIM48-201ENST00000417545 TMEM74BQ9NUR3 256 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 SLC17A6Q9P2U8 582 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 SPASTQ9UBP0 616 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 CORO1CQ9ULV4 474 aaPredicted RBP8.36□□□□□ -1.07
TRIM48-201ENST00000417545 SUFUQ9UMX1 484 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 DNAJC16Q9Y2G8 782 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 SNX11Q9Y5W9 270 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 COMMD10Q9Y6G5 202 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 OAS3Q9Y6K5 1087 aaKnown RBP8.36□□□□□ -1.07
TRIM48-201ENST00000417545 SLCO1B1Q9Y6L6 691 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 ADAMTS9Q9P2N4 1935 aa8.36□□□□□ -1.07
TRIM48-201ENST00000417545 TMEM131Q92545 1883 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 TLDC2A0PJX2 215 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 PABPN1LA6NDY0 278 aaKnown RBP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 GOLGA6L10A6NI86 522 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 FAM159BA6NKW6 160 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 PATE3B3GLJ2 98 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 SCAMP1O15126 338 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 KPNA5O15131 536 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 YKT6O15498 198 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 NUAK1O60285 661 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 OR1I1O60431 355 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 DFNA5O60443 496 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 KRT38O76015 456 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 WNT1P04628 370 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 APOA4P06727 396 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 F7P08709 466 aaPredicted RBP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 ALPPL2P10696 532 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 ACP5P13686 325 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 PKMP14618 531 aaKnown RBP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 ZNF8P17098 575 aaPredicted RBP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 RPS3P23396 243 aaKnown RBP eCLIP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 NBL1P41271 181 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 ABCG1P45844 678 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 LEPRP48357 1165 aaKnown RBP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 PPM1FP49593 454 aaPredicted RBP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 SERPINB9P50453 376 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 CCT8P50990 548 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 GRIK2Q13002 908 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 PDAP1Q13442 181 aaKnown RBP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 FZD2Q14332 565 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 EFTUD2Q15029 972 aaKnown RBP eCLIP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 ELOCQ15369 112 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 ALG11Q2TAA5 492 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 INAVAQ3KP66 663 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 TTLL9Q3SXZ7 439 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 AASDHQ4L235 1098 aaPredicted RBP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 GRTP1Q5TC63 336 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 PEAR1Q5VY43 1037 aaPredicted RBP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 SLC23A3Q6PIS1 610 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 MICALCLQ6ZW33 695 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 CYS1Q717R9 158 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 TAF8Q7Z7C8 310 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 GKN2Q86XP6 184 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 CNTN4Q8IWV2 1026 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 FSTL5Q8N475 847 aaPredicted RBP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 CLDN19Q8N6F1 224 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 RASGEF1AQ8N9B8 481 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 LMX1AQ8TE12 382 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 OR1E3Q8WZA6 343 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 LPGAT1Q92604 370 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 TSPAN17Q96FV3 270 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 TSNARE1Q96NA8 513 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 PAFAH2Q99487 392 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 CCM2Q9BSQ5 444 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 ACBD3Q9H3P7 528 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 SMOC1Q9H4F8 434 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 GAREM1Q9H706 876 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 PPCSQ9HAB8 311 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 RYDENQ9NUL5 291 aaKnown RBP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 TAS2R13Q9NYV9 303 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 MOCS1Q9NZB8 636 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 PSMC3IPQ9P2W1 217 aaPredicted RBP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 RABGEF1Q9UJ41 708 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 TRMT6Q9UJA5 497 aaKnown RBP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 CNOT6Q9ULM6 557 aaKnown RBP8.35□□□□□ -1.07
TRIM48-201ENST00000417545 GPR34Q9UPC5 381 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 SLC17A4Q9Y2C5 497 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 PRKAB1Q9Y478 270 aa8.35□□□□□ -1.07
TRIM48-201ENST00000417545 LRP4O75096 1905 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 A0A0C4DFX4 3053 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 IQANK1A0A1B0GTG1 560 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 FAM95CA0A1B0GW59 222 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 KLHL33A6NCF5 533 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 AGAP14A8MT82 685 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 PDZK1P1A8MUH7 402 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 C10orf142B7Z368 130 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 ARHGAP33O14559 1287 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 SNX2O60749 519 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 SDC3O75056 442 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 PIAS1O75925 651 aa8.34□□□□□ -1.07
TRIM48-201ENST00000417545 KRT37O76014 449 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms