RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 PCDHGC4Q9Y5F7 938 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 PHLPP1O60346 1717 aa12.79□□□□□ -0.36
SCN1B-202ENST00000415950 hCG_2039718K7EN88 272 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 PDHXO00330 501 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 FGF10O15520 208 aaPredicted RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 SUV39H1O43463 412 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 NOS1APO75052 506 aaPredicted RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 ITPKAP23677 461 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 GTF2E2P29084 291 aaKnown RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 SLC7A1P30825 629 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 DPYSL2Q16555 572 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 GPAT3Q53EU6 434 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 TAPT1Q6NXT6 567 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 RIOX2Q8IUF8 465 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 DEPDC4Q8N2C3 294 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 TOP1MTQ969P6 601 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 FCRL3Q96P31 734 aaPredicted RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 NODALQ96S42 347 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 ZYG11BQ9C0D3 744 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 GBA3Q9H227 469 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 INTS7Q9NVH2 962 aaKnown RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 H3BNX3 289 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 MATN2O00339 956 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 CASKO14936 926 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 DIRAS1O95057 198 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 ENO2P09104 434 aaPredicted RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 CLCQ05315 142 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 ZFP69Q49AA0 526 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 CYP20A1Q6UW02 462 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 ADAMTSL2Q86TH1 951 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 VANGL1Q8TAA9 524 aaPredicted RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 DQX1Q8TE96 717 aaKnown RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 NIFKQ9BYG3 293 aaKnown RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 PDP1Q9P0J1 537 aaPredicted RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 RAPGEFL1Q9UHV5 662 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 SQORQ9Y6N5 450 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 OR5F1O95221 314 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 FMO3P31513 532 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 SFSWAPQ12872 951 aaKnown RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 FBXL19Q6PCT2 694 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 CHSY3Q70JA7 882 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 PIK3C3Q8NEB9 887 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 SHKBP1Q8TBC3 707 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 C2orf49Q9BVC5 232 aaPredicted RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 HAPLN2Q9GZV7 340 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 C1orf21Q9H246 121 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 EIF2B4Q9UI10 523 aaKnown RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 ROBO1Q9Y6N7 1651 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 CLDN25C9JDP6 229 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 DYRK3O43781 588 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 LPOP22079 712 aaPredicted RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 ETV4P43268 484 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 PTPN9P43378 593 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 HSPA7P48741 367 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 PSEN2P49810 448 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 LILRA4P59901 499 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 ADAM17P78536 824 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 ELAVL2Q12926 359 aaKnown RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 PLPPR4Q7Z2D5 763 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 ZNF438Q7Z4V0 828 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 ZC3HC1Q86WB0 502 aaKnown RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 ATAD1Q8NBU5 361 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 PHC3Q8NDX5 983 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 ASB9Q96DX5 294 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 GFM1Q96RP9 751 aaKnown RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 ZCCHC2Q9C0B9 1178 aaKnown RBP12.78□□□□□ -0.36
SCN1B-202ENST00000415950 POLE4Q9NR33 117 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 VPS51Q9UID3 782 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 KCTD3Q9Y597 815 aa12.78□□□□□ -0.36
SCN1B-202ENST00000415950 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.77□□□□□ -0.36
SCN1B-202ENST00000415950 PQBP1O60828 265 aaKnown RBP12.77□□□□□ -0.36
SCN1B-202ENST00000415950 SNX4O95219 450 aa12.77□□□□□ -0.36
SCN1B-202ENST00000415950 MC4RP32245 332 aa12.77□□□□□ -0.36
SCN1B-202ENST00000415950 GRM5P41594 1212 aa12.77□□□□□ -0.36
SCN1B-202ENST00000415950 RXRGP48443 463 aa12.77□□□□□ -0.36
SCN1B-202ENST00000415950 RHDQ02161 417 aa12.77□□□□□ -0.36
SCN1B-202ENST00000415950 PGBD2Q6P3X8 592 aa12.77□□□□□ -0.36
SCN1B-202ENST00000415950 TAC4Q86UU9 113 aa12.77□□□□□ -0.36
SCN1B-202ENST00000415950 PCED1BQ96HM7 432 aa12.77□□□□□ -0.36
SCN1B-202ENST00000415950 GALPQ9UBC7 116 aa12.77□□□□□ -0.36
SCN1B-202ENST00000415950 FBXO10Q9UK96 956 aa12.77□□□□□ -0.36
SCN1B-202ENST00000415950 ITGB1BP2Q9UKP3 347 aa12.77□□□□□ -0.36
SCN1B-202ENST00000415950 CHURC1-FNTBB4DL54 471 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 NT5C1B-RDH14C9J2C7 533 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 ENPP3O14638 875 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 TSPAN1O60635 241 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 SGCGQ13326 291 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 C2orf73Q8N5S3 287 aaPredicted RBP12.77□□□□□ -0.37
SCN1B-202ENST00000415950 OR13C4Q8NGS5 318 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 SPACA7Q96KW9 195 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 WDR12Q9GZL7 423 aaKnown RBP12.77□□□□□ -0.37
SCN1B-202ENST00000415950 MTIF3Q9H2K0 278 aaKnown RBP12.77□□□□□ -0.37
SCN1B-202ENST00000415950 EBF1Q9UH73 591 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 A8MT66 165 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 SLC6A2P23975 617 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 RPL4P36578 427 aaKnown RBP12.77□□□□□ -0.37
SCN1B-202ENST00000415950 MZT2AQ6P582 158 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 KLHL35Q6PF15 583 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 LINGO4Q6UY18 593 aa12.77□□□□□ -0.37
SCN1B-202ENST00000415950 REPS1Q96D71 796 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms