RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 RAD51BO15315 384 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 GNSP15586 552 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 PHBP35232 272 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 ELK3P41970 407 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 GPR1P46091 355 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 OVGP1Q12889 678 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 PTPRCAPQ14761 206 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 SEPT7Q16181 437 aaKnown RBP14.38□□□□□ -0.11
SGCE-202ENST00000415788 ANKRD20A4Q4UJ75 823 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 KHDC1Q4VXA5 237 aaKnown RBP14.38□□□□□ -0.11
SGCE-202ENST00000415788 RAET1GQ6H3X3 334 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 KIAA0930Q6ICG6 404 aaPredicted RBP14.38□□□□□ -0.11
SGCE-202ENST00000415788 RFLNAQ6ZTI6 216 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 MTDHQ86UE4 582 aaKnown RBP14.38□□□□□ -0.11
SGCE-202ENST00000415788 IQCHQ86VS3 1027 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 ZBED8Q8IZ13 594 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 MFSD3Q96ES6 412 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 ZNF778Q96MU6 729 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 SPATA16Q9BXB7 569 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 TRIM55Q9BYV6 548 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 FZD3Q9NPG1 666 aa14.38□□□□□ -0.11
SGCE-202ENST00000415788 MBNL1Q9NR56 388 aaKnown RBP14.38□□□□□ -0.11
SGCE-202ENST00000415788 STX18Q9P2W9 335 aaKnown RBP14.38□□□□□ -0.11
SGCE-202ENST00000415788 ZC3H7BQ9UGR2 993 aaKnown RBP14.38□□□□□ -0.11
SGCE-202ENST00000415788 MTO1Q9Y2Z2 717 aaKnown RBP14.38□□□□□ -0.11
SGCE-202ENST00000415788 GOLGA8CPA6NN73 597 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 GSC2O15499 205 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 SRP72O76094 671 aaKnown RBP14.37□□□□□ -0.11
SGCE-202ENST00000415788 TGDSO95455 350 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 PRAMEF1O95521 474 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 PCCBP05166 539 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 ITGALP20701 1170 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 NMBRP28336 390 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 IGFALSP35858 605 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 TRIM23P36406 574 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 TMPRSS15P98073 1019 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 KPNB1Q14974 876 aaKnown RBP14.37□□□□□ -0.11
SGCE-202ENST00000415788 SPANXN3Q5MJ09 141 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 PEAR1Q5VY43 1037 aaPredicted RBP14.37□□□□□ -0.11
SGCE-202ENST00000415788 FAM91A1Q658Y4 838 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 AFTPHQ6ULP2 937 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 FAM151BQ6UXP7 276 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 ADAMTSL4Q6UY14 1074 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 KYAT3Q6YP21 454 aaKnown RBP14.37□□□□□ -0.11
SGCE-202ENST00000415788 LRRC74BQ6ZQY2 392 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 SYT12Q8IV01 421 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 C4orf33Q8N1A6 199 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 C1orf216Q8TAB5 229 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 PYROXD1Q8WU10 500 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 ATOH1Q92858 354 aaPredicted RBP14.37□□□□□ -0.11
SGCE-202ENST00000415788 SKA1Q96BD8 255 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 PTCD3Q96EY7 689 aaKnown RBP14.37□□□□□ -0.11
SGCE-202ENST00000415788 TBATAQ96M53 351 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 MIPEPQ99797 713 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 MIR1-1HGQ9H1L0 117 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 VPS37BQ9H9H4 285 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 AASDHPPTQ9NRN7 309 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 SLC2A6Q9UGQ3 507 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 FKBPLQ9UIM3 349 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 PILRBQ9UKJ0 227 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 CHMP2BQ9UQN3 213 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 PCDHGA5Q9Y5G8 931 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.37□□□□□ -0.11
SGCE-202ENST00000415788 SLC30A1Q9Y6M5 507 aa14.37□□□□□ -0.11
SGCE-202ENST00000415788 CCDC78A2IDD5 438 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 BCAT2O15382 392 aaPredicted RBP14.36□□□□□ -0.11
SGCE-202ENST00000415788 MAGEC1O60732 1142 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 BANF1O75531 89 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 PSMG1O95456 288 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 ITPKAP23677 461 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 MAOBP27338 520 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 RABIFP47224 123 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 ARSDP51689 593 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 YPEL5P62699 121 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 XIAPP98170 497 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 DYNC1I2Q13409 638 aaKnown RBP14.36□□□□□ -0.11
SGCE-202ENST00000415788 INPP5AQ14642 412 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 RCN1Q15293 331 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 GPR33Q49SQ1 333 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 SNX20Q7Z614 316 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 ABI3BPQ7Z7G0 1075 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 MFSD2AQ8NA29 543 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.36□□□□□ -0.11
SGCE-202ENST00000415788 FBXO36Q8NEA4 188 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 SCG3Q8WXD2 468 aaKnown RBP14.36□□□□□ -0.11
SGCE-202ENST00000415788 STMN2Q93045 179 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 HDAC10Q969S8 669 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 ZNF669Q96BR6 464 aaPredicted RBP14.36□□□□□ -0.11
SGCE-202ENST00000415788 VPS35Q96QK1 796 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 NR1H4Q96RI1 486 aaPredicted RBP14.36□□□□□ -0.11
SGCE-202ENST00000415788 MYOCQ99972 504 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 WDR83Q9BRX9 315 aaKnown RBP14.36□□□□□ -0.11
SGCE-202ENST00000415788 TRIM4Q9C037 500 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 WDR26Q9H7D7 661 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 NPHS2Q9NP85 383 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 SMOXQ9NWM0 555 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 FNDC3AQ9Y2H6 1198 aaKnown RBP14.36□□□□□ -0.11
SGCE-202ENST00000415788 TRPM6Q9BX84 2022 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 CUL9Q8IWT3 2517 aa14.36□□□□□ -0.11
SGCE-202ENST00000415788 A0A1B0GTW7 788 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms