RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 PMS2P54278 862 aa15.3■□□□□ 0.04
SBDSP1-201ENST00000415772 RPS15P62841 145 aaKnown RBP15.3■□□□□ 0.04
SBDSP1-201ENST00000415772 CDK18Q07002 472 aa15.3■□□□□ 0.04
SBDSP1-201ENST00000415772 TUBB3Q13509 450 aa15.3■□□□□ 0.04
SBDSP1-201ENST00000415772 GPR18Q14330 331 aa15.3■□□□□ 0.04
SBDSP1-201ENST00000415772 TTC30BQ8N4P2 665 aa15.3■□□□□ 0.04
SBDSP1-201ENST00000415772 UBXN4Q92575 508 aa15.3■□□□□ 0.04
SBDSP1-201ENST00000415772 AGAP3Q96P47 875 aa15.3■□□□□ 0.04
SBDSP1-201ENST00000415772 LHX9Q9NQ69 397 aa15.3■□□□□ 0.04
SBDSP1-201ENST00000415772 SLC23A2Q9UGH3 650 aa15.3■□□□□ 0.04
SBDSP1-201ENST00000415772 G3BP2Q9UN86 482 aaKnown RBP15.3■□□□□ 0.04
SBDSP1-201ENST00000415772 UBA6A0AVT1 1052 aaPredicted RBP15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 LRRD1A4D1F6 860 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 C21orf140B9A014 251 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 APOL1O14791 398 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 CHUKO15111 745 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 KIF1CO43896 1103 aaKnown RBP15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 MMP2P08253 660 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 H2AFZP0C0S5 128 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 IFI35P80217 286 aaPredicted RBP15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 ACY1Q03154 408 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 PPIDQ08752 370 aaKnown RBP15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 PDK1Q15118 436 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 FHL5Q5TD97 284 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 ARMC6Q6NXE6 501 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 ABRAXAS1Q6UWZ7 409 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 H2AFVQ71UI9 128 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 TMC3Q7Z5M5 1100 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 BRSK1Q8TDC3 778 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 CT55Q8WUE5 264 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 ACTL8Q9H568 366 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 SLC40A1Q9NP59 571 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 ACSS2Q9NR19 701 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 UVRAGQ9P2Y5 699 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 ADGRG1Q9Y653 693 aa15.29■□□□□ 0.04
SBDSP1-201ENST00000415772 KCNJ13O60928 360 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 FURINP09958 794 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 NELFEP18615 380 aaKnown RBP15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 KDELR1P24390 212 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 PGDP52209 483 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 TMEM115Q12893 351 aaPredicted RBP15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 SLC10A2Q12908 348 aaPredicted RBP15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 ZBTB17Q13105 803 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 SLC18A3Q16572 532 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 AGAP9Q5VTM2 703 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 TMEM135Q86UB9 458 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 BPHLQ86WA6 291 aaPredicted RBP15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 CNGA4Q8IV77 575 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 PQLC3Q8N755 202 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 KLHL6Q8WZ60 621 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 RNF157Q96PX1 679 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 SLC25A51Q9H1U9 297 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 DEF6Q9H4E7 631 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 BPIFA1Q9NP55 256 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 MAP10Q9P2G4 905 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 NFKBIL1Q9UBC1 381 aaPredicted RBP15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 EPHA6Q9UF33 1036 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 PCDHGA6Q9Y5G7 932 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 TLN1Q9Y490 2541 aaKnown RBP15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 SPTA1P02549 2419 aa15.28■□□□□ 0.04
SBDSP1-201ENST00000415772 ZNF106Q9H2Y7 1883 aaKnown RBP15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 K7EM74 188 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 NDST3O95803 873 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 RECKO95980 971 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 ZFXP17010 805 aaPredicted RBP15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 BPIP17213 487 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 CD97P48960 835 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 TAS2R40P59535 323 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 XRCC4Q13426 336 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 MESDQ14696 234 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 PPP2R5EQ16537 467 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 DNTTIP2Q5QJE6 756 aaKnown RBP15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 TMTC4Q5T4D3 741 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 ZDHHC20Q5W0Z9 365 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 WASH2PQ6VEQ5 465 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 AMZ2Q86W34 360 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 RFX6Q8HWS3 928 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 TMEM126BQ8IUX1 230 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 APLFQ8IW19 511 aaPredicted RBP15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 CNTD1Q8N815 330 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 CPT1CQ8TCG5 803 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 THAP4Q8WY91 577 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 FAF2Q96CS3 445 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 IMP4Q96G21 291 aaKnown RBP15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 FCRL4Q96PJ5 515 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 VPS35Q96QK1 796 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 SLC25A23Q9BV35 468 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 GPR87Q9BY21 358 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 TRIM5Q9C035 493 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 RAB33BQ9H082 229 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 BRD8Q9H0E9 1235 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 WASH6PQ9NQA3 447 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 ABHD10Q9NUJ1 306 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 NENFQ9UMX5 172 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 PSMD13Q9UNM6 376 aa15.27■□□□□ 0.04
SBDSP1-201ENST00000415772 BSNQ9UPA5 3926 aa15.26■□□□□ 0.03
SBDSP1-201ENST00000415772 A0A0A6YYK5 440 aaPredicted RBP15.26■□□□□ 0.03
SBDSP1-201ENST00000415772 CLEC18AA5D8T8 446 aa15.26■□□□□ 0.03
SBDSP1-201ENST00000415772 GOLGA6L3A6NEY3 463 aa15.26■□□□□ 0.03
SBDSP1-201ENST00000415772 MFAP3LO75121 409 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms