RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 AKAP7Q9P0M2 348 aaPredicted RBP14.48□□□□□ -0.09
CHD1-202ENST00000414220 SAMD15Q9P1V8 674 aa14.48□□□□□ -0.09
CHD1-202ENST00000414220 AK5Q9Y6K8 562 aa14.48□□□□□ -0.09
CHD1-202ENST00000414220 CCDC78A2IDD5 438 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 MGAT4DA6NG13 374 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 AP2A2O94973 939 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 PROS1P07225 676 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 GSTM1P09488 218 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 MLNP12872 115 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 PAMP19021 973 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 PSMA3P25788 255 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 NSG1P42857 185 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 TERF1P54274 439 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 GPLD1P80108 840 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 GSTM4Q03013 218 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 DMPKQ09013 629 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 ISXQ2M1V0 245 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 MAP9Q49MG5 647 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 BCL7AQ4VC05 210 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 KHDC1Q4VXA5 237 aaKnown RBP14.47□□□□□ -0.09
CHD1-202ENST00000414220 AGAP9Q5VTM2 703 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 CASC4Q6P4E1 433 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 ABRAXAS1Q6UWZ7 409 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 DET1Q7L5Y6 550 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 ZNF438Q7Z4V0 828 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 SPRED1Q7Z699 444 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 PIM3Q86V86 326 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 ZNF547Q8IVP9 402 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 MCUQ8NE86 351 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 OR4L1Q8NH43 312 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 OR10G6Q8NH81 332 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 GATA6Q92908 595 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 HDAC10Q969S8 669 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 CXorf40BQ96DE9 158 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 TRIM44Q96DX7 344 aaPredicted RBP14.47□□□□□ -0.09
CHD1-202ENST00000414220 SGF29Q96ES7 293 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 CNTNAP3BQ96NU0 1288 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 TSSK1BQ9BXA7 367 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 CNTNAP3Q9BZ76 1288 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 EPB41L1Q9H4G0 881 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 PRDM8Q9NQV8 689 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 SMARCAL1Q9NZC9 954 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 ASIC3Q9UHC3 531 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 PCYOX1Q9UHG3 505 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 ACSL5Q9ULC5 683 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 PCYT1BQ9Y5K3 369 aaPredicted RBP14.47□□□□□ -0.09
CHD1-202ENST00000414220 ST14Q9Y5Y6 855 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 LRP4O75096 1905 aa14.47□□□□□ -0.09
CHD1-202ENST00000414220 NCOR2Q9Y618 2525 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 TRBV5-4A0A0C4DH59 114 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 C1QTNF9BB2RNN3 333 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 CCL22O00626 93 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 NTN3O00634 580 aaPredicted RBP14.46□□□□□ -0.09
CHD1-202ENST00000414220 NDC80O14777 642 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 GPR39O43194 453 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 CPNE6O95741 557 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 C1QTNF9P0C862 333 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 XRCC1P18887 633 aaPredicted RBP14.46□□□□□ -0.09
CHD1-202ENST00000414220 MAGEA6P43360 314 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 CTSCP53634 463 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 INHBCP55103 352 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 ETF1P62495 437 aaKnown RBP14.46□□□□□ -0.09
CHD1-202ENST00000414220 EIF3IQ13347 325 aaKnown RBP14.46□□□□□ -0.09
CHD1-202ENST00000414220 NR1D2Q14995 579 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 AMZ1Q400G9 498 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 CREG2Q8IUH2 290 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 PPIL6Q8IXY8 311 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 OR2L2Q8NH16 312 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 PATE1Q8WXA2 126 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 LINC00615Q96LM1 132 aaPredicted RBP14.46□□□□□ -0.09
CHD1-202ENST00000414220 CCM2Q9BSQ5 444 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 DDX47Q9H0S4 455 aaKnown RBP14.46□□□□□ -0.09
CHD1-202ENST00000414220 MRM3Q9HC36 420 aaKnown RBP14.46□□□□□ -0.09
CHD1-202ENST00000414220 POT1Q9NUX5 634 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 CPNE7Q9UBL6 633 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 SLC23A2Q9UGH3 650 aa14.46□□□□□ -0.09
CHD1-202ENST00000414220 GOLGA4Q13439 2230 aaKnown RBP14.46□□□□□ -0.1
CHD1-202ENST00000414220 C17orf113A0A1B0GUU1 675 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 CCDC162PA2VCL2 907 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 SDR42E2A6NKP2 422 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 D6RAR5 112 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 SMAPO00193 183 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 PPM1DO15297 605 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 DUX1O43812 170 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 GOT2P00505 430 aaKnown RBP14.45□□□□□ -0.1
CHD1-202ENST00000414220 FTH1P02794 183 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 SLC35G4P0C7Q5 338 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 OR56A5P0C7T3 313 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 MGAT1P26572 445 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 RPL10P27635 214 aaKnown RBP14.45□□□□□ -0.1
CHD1-202ENST00000414220 PBLDP30039 288 aaPredicted RBP14.45□□□□□ -0.1
CHD1-202ENST00000414220 PRLHRP49683 370 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 EPHA4P54764 986 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 CLDN6P56747 220 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 OR1D5P58170 312 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 B4GALNT1Q00973 533 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 ACVR1Q04771 509 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 CAMK2BQ13554 666 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 KCNJ11Q14654 390 aa14.45□□□□□ -0.1
CHD1-202ENST00000414220 SEPT7Q16181 437 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms