RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 PKP2Q99959 881 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 GDF15Q99988 308 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PSD2Q9BQI7 771 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 GPR87Q9BY21 358 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ACE2Q9BYF1 805 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 FTOQ9C0B1 505 aaKnown RBP eCLIP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 TMEM117Q9H0C3 514 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 KCNN2Q9H2S1 579 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 METTL7AQ9H8H3 244 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 POLR1BQ9H9Y6 1135 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 GJB4Q9NTQ9 266 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PLCXD1Q9NUJ7 323 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 LMBRD1Q9NUN5 540 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 GIMAP4Q9NUV9 329 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 RHBDL2Q9NX52 303 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 TRPC4Q9UBN4 977 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 WNT16Q9UBV4 365 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ENOPH1Q9UHY7 261 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 CPA4Q9UI42 421 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 CDH9Q9ULB4 789 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 CDH7Q9ULB5 785 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 STAP1Q9ULZ2 295 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 GINS2Q9Y248 185 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 TSC22D4Q9Y3Q8 395 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 MAU2Q9Y6X3 613 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PFASO15067 1338 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ATXN2Q99700 1313 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 CDHR2Q9BYE9 1310 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PLB1Q6P1J6 1458 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 NACADO15069 1562 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 A0A1B0GTL3 188 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 C2orf92A0A1B0GVN3 265 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 GSTTP1A0A1W2PQM5 241 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 KANSL1LA0AUZ9 987 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 BCLAF3A2AJT9 711 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 SMIM30A4D0T7 59 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 C2orf71A6NGG8 1288 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 HMX3A6NHT5 357 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ISM1B1AKI9 464 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 H3BUI4 141 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 TRIM77I1YAP6 450 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF701M0R085 212 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 MYO1FO00160 1098 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 SLC33A1O00400 549 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 PODXLO00592 558 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 PRRG1O14668 218 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 PHGDHO43175 533 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ARHGEF9O43307 516 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 TBX1O43435 398 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 KCNQ3O43525 872 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 DLX3O60479 287 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 TBX19O60806 448 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 FZD7O75084 574 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 VPS4BO75351 444 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 JRKO75564 520 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 SERPINI2O75830 405 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 RHOBTB1O94844 696 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 RAB3DO95716 219 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 OXSR1O95747 527 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 CH25HO95992 272 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 MT-ATP6P00846 226 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 POMCP01189 267 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 CALCAP01258 141 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ITGA2BP08514 1039 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 OR4E1P0C645 316 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 CALCBP10092 127 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 UROSP10746 265 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 SRCP12931 536 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 CPA3P15088 417 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 CBR1P16152 277 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 SFNP31947 248 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 GTF2H1P32780 548 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ATP5C1P36542 298 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 FEN1P39748 380 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 SLC1A1P43005 524 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 GSTM5P46439 218 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 PIK3CGP48736 1102 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 DGKEP52429 567 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 PLK1P53350 603 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 CDH4P55283 916 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 RAB1AP62820 205 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 SKP1P63208 163 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ATP2C1P98194 919 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 FMO1Q01740 532 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 MERTKQ12866 999 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ILF2Q12905 390 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 TRAF2Q12933 501 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 SLAQ13239 276 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 GCKRQ14397 625 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 PCLAFQ15004 111 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 RAB30Q15771 203 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ADRM1Q16186 407 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 NTRK3Q16288 839 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 HKDC1Q2TB90 917 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 TBRG1Q3YBR2 411 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 NADK2Q4G0N4 442 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 TEX30Q5JUR7 227 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 COLEC12Q5KU26 742 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 MANEAQ5SRI9 462 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 LCN1P1Q5VSP4 162 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms