RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 IL10RAQ13651 578 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 PDK2Q15119 407 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 SLC14A2Q15849 920 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 HADHQ16836 314 aaKnown RBP11.93□□□□□ -0.5
LIMS2-210ENST00000413578 NADK2Q4G0N4 442 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 FHL5Q5TD97 284 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 CPZQ66K79 652 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 FAM92BQ6ZTR7 304 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 THAP4Q8WY91 577 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 SEC14L1Q92503 715 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 UBXN4Q92575 508 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 IMP4Q96G21 291 aaKnown RBP11.93□□□□□ -0.5
LIMS2-210ENST00000413578 VPS35Q96QK1 796 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 BPIFA3Q9BQP9 254 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 GPR87Q9BY21 358 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 PDE7BQ9NP56 450 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 RAD18Q9NS91 495 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 NENFQ9UMX5 172 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 VPS4AQ9UN37 437 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 SHOC2Q9UQ13 582 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 ZNF711Q9Y462 761 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 ITPR2Q14571 2701 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 CSMD1Q96PZ7 3565 aa11.93□□□□□ -0.5
LIMS2-210ENST00000413578 A0A087X0T9 212 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 CEACAM4O75871 244 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 CDK14O94921 469 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 PIRTP0C851 137 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 FAM228BP0C875 321 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 IDSP22304 550 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 FECHP22830 423 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 TAS2R40P59535 323 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 RPS18P62269 152 aaKnown RBP11.92□□□□□ -0.5
LIMS2-210ENST00000413578 TYRO3Q06418 890 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 KCNAB1Q14722 419 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 FAM182AQ5T1J6 154 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 IRGCQ6NXR0 463 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 CYB5D1Q6P9G0 228 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 FAM199XQ6PEV8 388 aaPredicted RBP11.92□□□□□ -0.5
LIMS2-210ENST00000413578 CERS6Q6ZMG9 384 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 SYVN1Q86TM6 617 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 PLD5Q8N7P1 536 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 KCTD6Q8NC69 237 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 GPR150Q8NGU9 434 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 ADAMTS17Q8TE56 1095 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 SSC4DQ8WTU2 575 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 SYN2Q92777 582 aaPredicted RBP11.92□□□□□ -0.5
LIMS2-210ENST00000413578 CUEDC1Q9NWM3 386 aaPredicted RBP11.92□□□□□ -0.5
LIMS2-210ENST00000413578 RARRES3Q9UL19 164 aa11.92□□□□□ -0.5
LIMS2-210ENST00000413578 BZW2Q9Y6E2 419 aaKnown RBP11.92□□□□□ -0.5
LIMS2-210ENST00000413578 AURKAO14965 403 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 KCNJ13O60928 360 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 PROSCO94903 275 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 EBLN1P0CF75 366 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 LPOP22079 712 aaPredicted RBP11.91□□□□□ -0.5
LIMS2-210ENST00000413578 ACY1Q03154 408 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 CDK18Q07002 472 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 DMPKQ09013 629 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 NR1I3Q14994 352 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 ATP13A5Q4VNC0 1218 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 BPHLQ86WA6 291 aaPredicted RBP11.91□□□□□ -0.5
LIMS2-210ENST00000413578 KMT5CQ86Y97 462 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 MAP7D3Q8IWC1 876 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 D2HGDHQ8N465 521 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 EFCAB3Q8N7B9 438 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 Q8NA96 180 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 SIDT2Q8NBJ9 832 aaKnown RBP11.91□□□□□ -0.5
LIMS2-210ENST00000413578 CCNYQ8ND76 341 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 DTX3LQ8TDB6 740 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 RAPGEF5Q92565 580 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 CXorf40BQ96DE9 158 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 ZNF514Q96K75 400 aaPredicted RBP11.91□□□□□ -0.5
LIMS2-210ENST00000413578 RNF157Q96PX1 679 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 MAP3K3Q99759 626 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 SLC25A23Q9BV35 468 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 XPO4Q9C0E2 1151 aaKnown RBP11.91□□□□□ -0.5
LIMS2-210ENST00000413578 FGF21Q9NSA1 209 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 SPO11Q9Y5K1 396 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 CREBBPQ92793 2442 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 ZNF106Q9H2Y7 1883 aaKnown RBP11.91□□□□□ -0.5
LIMS2-210ENST00000413578 SHANK1Q9Y566 2161 aa11.91□□□□□ -0.5
LIMS2-210ENST00000413578 A0A1W2PQJ5 194 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 ZNF487B1APH4 448 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 KDELR1P24390 212 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 CA5AP35218 305 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 GJC1P36383 396 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 PBX1P40424 430 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 SSR1P43307 286 aaKnown RBP11.9□□□□□ -0.5
LIMS2-210ENST00000413578 PGDP52209 483 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 CTSCP53634 463 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 TUBB4BP68371 445 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 TMEM115Q12893 351 aaPredicted RBP11.9□□□□□ -0.5
LIMS2-210ENST00000413578 CHAF1BQ13112 559 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 TUBB2AQ13885 445 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 INPP5JQ15735 1006 aaPredicted RBP11.9□□□□□ -0.5
LIMS2-210ENST00000413578 RPE65Q16518 533 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 FILIP1LQ4L180 1135 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 IZUMO3Q5VZ72 239 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 SLC9A4Q6AI14 798 aa11.9□□□□□ -0.5
LIMS2-210ENST00000413578 ALKBH5Q6P6C2 394 aaKnown RBP11.9□□□□□ -0.5
LIMS2-210ENST00000413578 FAM83HQ6ZRV2 1179 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms