RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 SNX9Q9Y5X1 595 aa7.12□□□□□ -1.27
CPSF7-203ENST00000413184 USF3Q68DE3 2245 aa7.12□□□□□ -1.27
CPSF7-203ENST00000413184 ARID1AO14497 2285 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 HMGB1P1B2RPK0 211 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 IDSB3KWA1 339 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 MT-ND3P03897 115 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 KRT1P04264 644 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 HOXD4P09016 255 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 RALAP11233 206 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 TCF4P15884 667 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 IDSP22304 550 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 POLR2BP30876 1174 aaKnown RBP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 CTSOP43234 321 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 SSR1P43307 286 aaKnown RBP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 IRAK1P51617 712 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 DCAF7P61962 342 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 RPL7AP62424 266 aaKnown RBP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 COG7P83436 770 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 KLF1Q13351 362 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 PDCLQ13371 301 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 PTK6Q13882 451 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 SEPT7Q16181 437 aaKnown RBP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 HIF1AQ16665 826 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 PTPN20Q4JDL3 420 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 ATP13A4Q4VNC1 1196 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 PPP1R15BQ5SWA1 713 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 B3GNTL1Q67FW5 361 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 DNAJC24Q6P3W2 148 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 TAF8Q7Z7C8 310 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 CCDC50Q8IVM0 306 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 TAB3Q8N5C8 712 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 SLC4A11Q8NBS3 891 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 ATL2Q8NHH9 583 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 EXD1Q8NHP7 514 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 WFDC5Q8TCV5 224 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 PPP4R1Q8TF05 950 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 TSACCQ96A04 125 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 RNF25Q96BH1 459 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 TMA16Q96EY4 203 aaKnown RBP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 MCEEQ96PE7 176 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 KCNK16Q96T55 309 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 HEMGNQ9BXL5 484 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 DPEP2Q9H4A9 486 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 ASB7Q9H672 318 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 ZBTB20Q9HC78 741 aaPredicted RBP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 COQ3Q9NZJ6 369 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 HMGXB4Q9UGU5 601 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 MEMO1Q9Y316 297 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.11□□□□□ -1.27
CPSF7-203ENST00000413184 C2CD2Q9Y426 696 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 RYR2Q92736 4967 aa7.11□□□□□ -1.27
CPSF7-203ENST00000413184 FAM92AA1XBS5 289 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 FIGNL2A6NMB9 653 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 GOLGA8SH3BPF8 625 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 CLDN4O14493 209 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 SOCS6O14544 535 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 EIF3HO15372 352 aaKnown RBP eCLIP7.1□□□□□ -1.27
CPSF7-203ENST00000413184 MED7O43513 233 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 SLC19A2O60779 497 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 RASGRP1O95267 797 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 SHBGP04278 402 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 ERBB2P04626 1255 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 TPOP07202 933 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 PAEPP09466 180 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 NUDT17P0C025 328 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 MYZAPP0CAP1 466 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 IVDP26440 423 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 ATICP31939 592 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 NNMTP40261 264 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 MAZP56270 477 aaKnown RBP7.1□□□□□ -1.27
CPSF7-203ENST00000413184 RPS21P63220 83 aaKnown RBP7.1□□□□□ -1.27
CPSF7-203ENST00000413184 SGCGQ13326 291 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 MYBPC3Q14896 1274 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 PRKD1Q15139 912 aaPredicted RBP7.1□□□□□ -1.27
CPSF7-203ENST00000413184 PPP1R7Q15435 360 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 KRT71Q3SY84 523 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 FAM174BQ3ZCQ3 159 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 ZNF324BQ6AW86 544 aaPredicted RBP7.1□□□□□ -1.27
CPSF7-203ENST00000413184 TTC19Q6DKK2 380 aaPredicted RBP7.1□□□□□ -1.27
CPSF7-203ENST00000413184 TXNRD3NBQ6F5E7 133 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 KLHDC10Q6PID8 442 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 SPOCD1Q6ZMY3 1216 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 CAPN12Q6ZSI9 719 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 SYDE1Q6ZW31 735 aaPredicted RBP7.1□□□□□ -1.27
CPSF7-203ENST00000413184 ZZZ3Q8IYH5 903 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 C3orf20Q8ND61 904 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 JOSD2Q8TAC2 188 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 FAXDC2Q96IV6 333 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 RPL10LQ96L21 214 aaKnown RBP7.1□□□□□ -1.27
CPSF7-203ENST00000413184 FAM118BQ9BPY3 351 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 OSBPL8Q9BZF1 889 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 BRD8Q9H0E9 1235 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 ZNF552Q9H707 407 aaPredicted RBP7.1□□□□□ -1.27
CPSF7-203ENST00000413184 VRTNQ9H8Y1 702 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 CYP3A43Q9HB55 503 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 COMMD8Q9NX08 183 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 OSER1Q9NX31 292 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 IL37Q9NZH6 218 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 WHRNQ9P202 907 aa7.1□□□□□ -1.27
CPSF7-203ENST00000413184 SEC14L3Q9UDX4 400 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms