RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 CCDC112Q8NEF3 446 aa18.75■□□□□ 0.59
SF3A1-202ENST00000411423 OR4D9Q8NGE8 314 aa18.75■□□□□ 0.59
SF3A1-202ENST00000411423 FAM96AQ9H5X1 160 aa18.75■□□□□ 0.59
SF3A1-202ENST00000411423 CPNE5Q9HCH3 593 aa18.75■□□□□ 0.59
SF3A1-202ENST00000411423 OGFRQ9NZT2 677 aa18.75■□□□□ 0.59
SF3A1-202ENST00000411423 KIR2DS5A0A0G2JLQ3 304 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 A0A0G2JNG1 304 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 OR52A4PA6NMU1 304 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 C2orf81A6NN90 581 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 AGAP14A8MT82 685 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 KIR2DS3K7RE56 304 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 PRAMEF10O60809 474 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 PPFIA2O75334 1257 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 JMJD7P0C870 316 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 FGF3P11487 239 aaPredicted RBP18.74■□□□□ 0.59
SF3A1-202ENST00000411423 MLLT3P42568 568 aaPredicted RBP18.74■□□□□ 0.59
SF3A1-202ENST00000411423 CDKN1CP49918 316 aaPredicted RBP18.74■□□□□ 0.59
SF3A1-202ENST00000411423 MAPK10P53779 464 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 ITGA9Q13797 1035 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 KIR2DS5Q14953 304 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 TGIF1Q15583 401 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 CLPPQ16740 277 aaPredicted RBP18.74■□□□□ 0.59
SF3A1-202ENST00000411423 LDLRAP1Q5SW96 308 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 TMEM220Q6QAJ8 160 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 ABRAXAS1Q6UWZ7 409 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 DET1Q7L5Y6 550 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 JAMLQ86YT9 394 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 USP7Q93009 1102 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 DNAJC1Q96KC8 554 aaKnown RBP18.74■□□□□ 0.59
SF3A1-202ENST00000411423 PDP2Q9P2J9 529 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 PCDHGA7Q9Y5G6 932 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 SLC30A1Q9Y6M5 507 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 FAM208BQ5VWN6 2430 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 MGAQ8IWI9 3026 aa18.74■□□□□ 0.59
SF3A1-202ENST00000411423 POP7O75817 140 aaKnown RBP18.73■□□□□ 0.59
SF3A1-202ENST00000411423 AP2A1O95782 977 aa18.73■□□□□ 0.59
SF3A1-202ENST00000411423 XRCC1P18887 633 aaPredicted RBP18.73■□□□□ 0.59
SF3A1-202ENST00000411423 GPLD1P80108 840 aa18.73■□□□□ 0.59
SF3A1-202ENST00000411423 SNX1Q13596 522 aa18.73■□□□□ 0.59
SF3A1-202ENST00000411423 NFE2L1Q14494 772 aa18.73■□□□□ 0.59
SF3A1-202ENST00000411423 RPS6KA1Q15418 735 aa18.73■□□□□ 0.59
SF3A1-202ENST00000411423 SOWAHCQ53LP3 525 aaPredicted RBP18.73■□□□□ 0.59
SF3A1-202ENST00000411423 TMEM71Q6P5X7 295 aa18.73■□□□□ 0.59
SF3A1-202ENST00000411423 SGF29Q96ES7 293 aa18.73■□□□□ 0.59
SF3A1-202ENST00000411423 CMKLR1Q99788 373 aa18.73■□□□□ 0.59
SF3A1-202ENST00000411423 TLR10Q9BXR5 811 aa18.73■□□□□ 0.59
SF3A1-202ENST00000411423 ASB8Q9H765 288 aa18.73■□□□□ 0.59
SF3A1-202ENST00000411423 ETNK1Q9HBU6 452 aa18.73■□□□□ 0.59
SF3A1-202ENST00000411423 OCIAD1Q9NX40 245 aa18.73■□□□□ 0.59
SF3A1-202ENST00000411423 SMG1Q96Q15 3661 aaKnown RBP18.72■□□□□ 0.59
SF3A1-202ENST00000411423 PTPRQQ9UMZ3 2332 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 OR5K4A6NMS3 321 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 PDZK1P1A8MUH7 402 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 EFSO43281 561 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 CCDC175P0C221 793 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 ZSCAN5DPP0CG00 497 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 SLC2A4P14672 509 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 PBLDP30039 288 aaPredicted RBP18.72■□□□□ 0.59
SF3A1-202ENST00000411423 GRIA1P42261 906 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 MAPK9P45984 424 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 CXADRP78310 365 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 DMPKQ09013 629 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 GTF2H3Q13889 308 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 AGAP9Q5VTM2 703 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 WASH2PQ6VEQ5 465 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 ZFAND4Q86XD8 727 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 GPR150Q8NGU9 434 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 OR10G6Q8NH81 332 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 NCSTNQ92542 709 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 TMEM159Q96B96 161 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 FCRL3Q96P31 734 aaPredicted RBP18.72■□□□□ 0.59
SF3A1-202ENST00000411423 WASH6PQ9NQA3 447 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 ACSL6Q9UKU0 697 aa18.72■□□□□ 0.59
SF3A1-202ENST00000411423 CCDC78A2IDD5 438 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 LILRA5A6NI73 299 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 A8MU76 341 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 HGSO14964 777 aaPredicted RBP18.71■□□□□ 0.59
SF3A1-202ENST00000411423 NVLO15381 856 aaKnown RBP18.71■□□□□ 0.59
SF3A1-202ENST00000411423 DUX1O43812 170 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 ZNF189O75820 626 aaPredicted RBP18.71■□□□□ 0.59
SF3A1-202ENST00000411423 CRTAMO95727 393 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 GFERP55789 205 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 POU6F1Q14863 301 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 P3H1Q32P28 736 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 SNAP47Q5SQN1 464 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 FNBP1LQ5T0N5 605 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 TMEM26Q6ZUK4 368 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 LILRA3Q8N6C8 439 aaPredicted RBP18.71■□□□□ 0.59
SF3A1-202ENST00000411423 OR52K1Q8NGK4 314 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 AHCYL2Q96HN2 611 aaKnown RBP18.71■□□□□ 0.59
SF3A1-202ENST00000411423 TTC25Q96NG3 672 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 PPP1R2P1Q96PQ5 205 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 DPH1Q9BZG8 443 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 LRRC40Q9H9A6 602 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 PSMD13Q9UNM6 376 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 PPP2R2CQ9Y2T4 447 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 IGSF10Q6WRI0 2623 aa18.71■□□□□ 0.59
SF3A1-202ENST00000411423 ZW10O43264 779 aa18.7■□□□□ 0.58
SF3A1-202ENST00000411423 TYRP1P17643 537 aa18.7■□□□□ 0.58
SF3A1-202ENST00000411423 MSH3P20585 1137 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms