RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 FAM189BP81408 668 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 RBBP7Q16576 425 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 TRIM71Q2Q1W2 868 aaKnown RBP16.5■□□□□ 0.23
LIMS2-208ENST00000410011 FUT11Q495W5 492 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 AARS2Q5JTZ9 985 aaKnown RBP16.5■□□□□ 0.23
LIMS2-208ENST00000410011 FNDC5Q8NAU1 212 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 ATAD1Q8NBU5 361 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 PDPRQ8NCN5 879 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 OR8J3Q8NGG0 315 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 RMDN1Q96DB5 314 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 NSMCE3Q96MG7 304 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 COG8Q96MW5 612 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 TMEM74Q96NL1 305 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 CCDC115Q96NT0 180 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 CINPQ9BW66 212 aaPredicted RBP16.5■□□□□ 0.23
LIMS2-208ENST00000410011 NTN4Q9HB63 628 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 PCDHGA11Q9Y5H2 935 aa16.5■□□□□ 0.23
LIMS2-208ENST00000410011 UPK1AO00322 258 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 ENPP3O14638 875 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 SNAP29O95721 258 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 HPRP00739 348 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 ESR1P03372 595 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 RAP2AP10114 183 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 STT3AP46977 705 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 SMARCB1Q12824 385 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 TUBA3CQ13748 450 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 SMU1Q2TAY7 513 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 CTXN3Q4LDR2 81 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 TIGD2Q4W5G0 525 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 CTSL3PQ5NE16 218 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 FAM117BQ6P1L5 589 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 Q6ZNX1 250 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 RNF165Q6ZSG1 346 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 SLC24A5Q71RS6 500 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 HOMEZQ8IX15 550 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 CDK5RAP1Q96SZ6 601 aaKnown RBP16.49■□□□□ 0.23
LIMS2-208ENST00000410011 ACOX2Q99424 681 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 TRIM8Q9BZR9 551 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 GORASP2Q9H8Y8 452 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 POLR1BQ9H9Y6 1135 aa16.49■□□□□ 0.23
LIMS2-208ENST00000410011 H0Y858 1186 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 ANKRD28O15084 1053 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 ADAMTS4O75173 837 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 OR4F21O95013 312 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 ATE1O95260 518 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 ALBP02768 609 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 HMBSP08397 361 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 PTGER3P43115 390 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 ARSFP54793 590 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 TGFBIQ15582 683 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 ZNF829Q3KNS6 432 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-208ENST00000410011 CLLU1OSQ5K130 101 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 ELMSAN1Q6PJG2 1045 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 ZNF773Q6PK81 442 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 KCTD8Q6ZWB6 473 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 LGI2Q8N0V4 545 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 OR52E4Q8NGH9 312 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 MIPOL1Q8TD10 442 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 EEF1AKMT1Q8WVE0 214 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 TLR9Q9NR96 1032 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 HEMK1Q9Y5R4 338 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-208ENST00000410011 MANSC4A6NHS7 340 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-208ENST00000410011 H3BNC9 293 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 ACSL4O60488 711 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 CELF2O95319 508 aaKnown RBP16.48■□□□□ 0.23
LIMS2-208ENST00000410011 CLIC3O95833 236 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 F11P03951 625 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 JAK1P23458 1154 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 OR1G1P47890 313 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 ENTPD1P49961 510 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 TMBIM6P55061 237 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 OR4D2P58180 307 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 ERVPABLB-1P60509 514 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 PWP1Q13610 501 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 IL31Q6EBC2 164 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 TBPL2Q6SJ96 375 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 RTN4RL1Q86UN2 441 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-208ENST00000410011 PIANPQ8IYJ0 282 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 STK40Q8N2I9 435 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 SFRP1Q8N474 314 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 CARNMT1Q8N4J0 409 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 TTC9BQ8N6N2 239 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 LINGO1Q96FE5 620 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 AURKBQ96GD4 344 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-208ENST00000410011 RNF145Q96MT1 663 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 CGREF1Q99674 301 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 CD274Q9NZQ7 290 aa16.48■□□□□ 0.23
LIMS2-208ENST00000410011 TLR5O60602 858 aa16.47■□□□□ 0.23
LIMS2-208ENST00000410011 ALPLP05186 524 aa16.47■□□□□ 0.23
LIMS2-208ENST00000410011 ASGR1P07306 291 aa16.47■□□□□ 0.23
LIMS2-208ENST00000410011 GGT1P19440 569 aa16.47■□□□□ 0.23
LIMS2-208ENST00000410011 MSH3P20585 1137 aa16.47■□□□□ 0.23
LIMS2-208ENST00000410011 RGRP47804 291 aa16.47■□□□□ 0.23
LIMS2-208ENST00000410011 DAG1Q14118 895 aa16.47■□□□□ 0.23
LIMS2-208ENST00000410011 FAM98BQ52LJ0 330 aaKnown RBP16.47■□□□□ 0.23
LIMS2-208ENST00000410011 PSAPL1Q6NUJ1 521 aa16.47■□□□□ 0.23
LIMS2-208ENST00000410011 OFCC1Q8IZS5 231 aa16.47■□□□□ 0.23
LIMS2-208ENST00000410011 SIDT2Q8NBJ9 832 aaKnown RBP16.47■□□□□ 0.23
LIMS2-208ENST00000410011 OR13F1Q8NGS4 319 aa16.47■□□□□ 0.23
LIMS2-208ENST00000410011 VPS50Q96JG6 964 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms