RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CIPCQ9C0C6 399 aa4.87□□□□□ -1.63
LSM5-205ENST00000409952 PIGMQ9H3S5 423 aa4.87□□□□□ -1.63
LSM5-205ENST00000409952 RWDD1Q9H446 243 aaPredicted RBP4.87□□□□□ -1.63
LSM5-205ENST00000409952 ZNF768Q9H5H4 540 aaKnown RBP4.87□□□□□ -1.63
LSM5-205ENST00000409952 MINDY3Q9H8M7 445 aa4.87□□□□□ -1.63
LSM5-205ENST00000409952 ACTR5Q9H9F9 607 aaPredicted RBP4.87□□□□□ -1.63
LSM5-205ENST00000409952 SLC2A4RGQ9NR83 387 aa4.87□□□□□ -1.63
LSM5-205ENST00000409952 KCTD5Q9NXV2 234 aa4.87□□□□□ -1.63
LSM5-205ENST00000409952 TFCP2L1Q9NZI6 479 aa4.87□□□□□ -1.63
LSM5-205ENST00000409952 RABL2AQ9UBK7 228 aaPredicted RBP4.87□□□□□ -1.63
LSM5-205ENST00000409952 SPASTQ9UBP0 616 aa4.87□□□□□ -1.63
LSM5-205ENST00000409952 CTNNA3Q9UI47 895 aa4.87□□□□□ -1.63
LSM5-205ENST00000409952 ING1Q9UK53 422 aaPredicted RBP4.87□□□□□ -1.63
LSM5-205ENST00000409952 GMEB2Q9UKD1 530 aa4.87□□□□□ -1.63
LSM5-205ENST00000409952 STRAPQ9Y3F4 350 aaKnown RBP4.87□□□□□ -1.63
LSM5-205ENST00000409952 SALL3Q9BXA9 1300 aa4.87□□□□□ -1.63
LSM5-205ENST00000409952 A0A096LPK6 155 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 C13orf42A0A1B0GVH6 325 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 KANSL1LA0AUZ9 987 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 KPNA7A9QM74 516 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 H0YIZ8 118 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 RNMTO43148 476 aaKnown RBP4.86□□□□□ -1.63
LSM5-205ENST00000409952 RIPK2O43353 540 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 SELENOFO60613 162 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 TOMM70O94826 608 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 TMCC1O94876 653 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 SPDEFO95238 335 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 KCNK5O95279 499 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 FGBP02675 491 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 ICAM1P05362 532 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 NDUFB7P17568 137 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 HOXC9P31274 260 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 ASMTP46597 345 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 GPR12P47775 334 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 SOX2P48431 317 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 IFNAR2P48551 515 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 PTENP60484 403 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 PRKCEQ02156 737 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 DPTQ07507 201 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 ITGADQ13349 1161 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 KPNB1Q14974 876 aaKnown RBP4.86□□□□□ -1.63
LSM5-205ENST00000409952 LARS2Q15031 903 aaKnown RBP4.86□□□□□ -1.63
LSM5-205ENST00000409952 SLC39A14Q15043 492 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 OASLQ15646 514 aaKnown RBP4.86□□□□□ -1.63
LSM5-205ENST00000409952 ESCO2Q56NI9 601 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 CES4AQ5XG92 561 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 LAIR1Q6GTX8 287 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 TMEM65Q6PI78 240 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 PAPD4Q6PIY7 484 aaKnown RBP4.86□□□□□ -1.63
LSM5-205ENST00000409952 PQLC2Q6ZP29 291 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 TOM1L2Q6ZVM7 507 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 TRAPPC11Q7Z392 1133 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 TLK2Q86UE8 772 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 CCDC25Q86WR0 208 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 TMEM173Q86WV6 379 aaPredicted RBP4.86□□□□□ -1.63
LSM5-205ENST00000409952 LDLRAD3Q86YD5 345 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 FAM219AQ8IW50 185 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 UEVLDQ8IX04 471 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 ELMOD2Q8IZ81 293 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 NCOA7Q8NI08 942 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 FAM216AQ8WUB2 273 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 ALG14Q96F25 216 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 GDAP1L1Q96MZ0 367 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 MUS81Q96NY9 551 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 SMC6Q96SB8 1091 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 DDOQ99489 341 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 LMAN1LQ9HAT1 526 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 RNPEPL1Q9HAU8 725 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 FANCFQ9NPI8 374 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 SERTAD4Q9NUC0 356 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 TMEM161AQ9NX61 479 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 P4HTMQ9NXG6 502 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 ASIC5Q9NY37 505 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.86□□□□□ -1.63
LSM5-205ENST00000409952 NDRG3Q9UGV2 375 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 TRMT6Q9UJA5 497 aaKnown RBP4.86□□□□□ -1.63
LSM5-205ENST00000409952 CCPG1Q9ULG6 757 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 SLC8A2Q9UPR5 921 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 FAM205AQ6ZU69 1335 aa4.86□□□□□ -1.63
LSM5-205ENST00000409952 A0A0A6YYC8 382 aaPredicted RBP4.85□□□□□ -1.63
LSM5-205ENST00000409952 TRBV2A0A0J9YWF9 115 aa4.85□□□□□ -1.63
LSM5-205ENST00000409952 ELOVL7A1L3X0 281 aa4.85□□□□□ -1.63
LSM5-205ENST00000409952 DDTLA6NHG4 134 aaPredicted RBP4.85□□□□□ -1.63
LSM5-205ENST00000409952 TMEM200CA6NKL6 621 aa4.85□□□□□ -1.63
LSM5-205ENST00000409952 I3L1I5 382 aaPredicted RBP4.85□□□□□ -1.63
LSM5-205ENST00000409952 CLDN4O14493 209 aa4.85□□□□□ -1.63
LSM5-205ENST00000409952 VCYO14598 125 aa4.85□□□□□ -1.63
LSM5-205ENST00000409952 MPPED1O15442 326 aa4.85□□□□□ -1.63
LSM5-205ENST00000409952 TTI1O43156 1089 aa4.85□□□□□ -1.63
LSM5-205ENST00000409952 FAM20BO75063 409 aa4.85□□□□□ -1.63
LSM5-205ENST00000409952 EBLN1P0CF75 366 aa4.85□□□□□ -1.63
LSM5-205ENST00000409952 C8orf89P0DMQ9 161 aa4.85□□□□□ -1.63
LSM5-205ENST00000409952 CYP2D6P10635 497 aa4.85□□□□□ -1.63
LSM5-205ENST00000409952 UBA1P22314 1058 aaKnown RBP4.85□□□□□ -1.63
LSM5-205ENST00000409952 ITGB8P26012 769 aa4.85□□□□□ -1.63
LSM5-205ENST00000409952 HOXD9P28356 352 aaPredicted RBP4.85□□□□□ -1.63
LSM5-205ENST00000409952 PBLDP30039 288 aaPredicted RBP4.85□□□□□ -1.63
LSM5-205ENST00000409952 SFNP31947 248 aa4.85□□□□□ -1.63
LSM5-205ENST00000409952 PTGS2P35354 604 aa4.85□□□□□ -1.63
LSM5-205ENST00000409952 SLC16A2P36021 539 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms