RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 RXRGP48443 463 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 ST8SIA6P61647 398 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 ART3Q13508 389 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 FNDC3BQ53EP0 1204 aaKnown RBP14.17□□□□□ -0.14
MINDY4-202ENST00000409881 ATXN7L2Q5T6C5 722 aaPredicted RBP14.17□□□□□ -0.14
MINDY4-202ENST00000409881 METTL21CQ5VZV1 264 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 C4orf22Q6V702 233 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 GPR141Q7Z602 305 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 PGAM4Q8N0Y7 254 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 RP9Q8TA86 221 aaKnown RBP14.17□□□□□ -0.14
MINDY4-202ENST00000409881 NPAS2Q99743 824 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 SEMA3CQ99985 751 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 TBC1D23Q9NUY8 699 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 UBP1Q9NZI7 540 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 LHX3Q9UBR4 397 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 CA14Q9ULX7 337 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 COQ6Q9Y2Z9 468 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 TCF20Q9UGU0 1960 aaKnown RBP14.17□□□□□ -0.14
MINDY4-202ENST00000409881 F5P12259 2224 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 MYO18AQ92614 2054 aaKnown RBP14.17□□□□□ -0.14
MINDY4-202ENST00000409881 PSMD12O00232 456 aaPredicted RBP14.17□□□□□ -0.14
MINDY4-202ENST00000409881 CHRNGP07510 517 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 IDO1P14902 403 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 HALP42357 657 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 SEC13P55735 322 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 PRAMEP78395 509 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 DLG2Q15700 870 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 PDCD4Q53EL6 469 aaKnown RBP14.17□□□□□ -0.14
MINDY4-202ENST00000409881 DGKKQ5KSL6 1271 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 C22orf39Q6P5X5 142 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 CES3Q6UWW8 571 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 METTL3Q86U44 580 aaKnown RBP14.17□□□□□ -0.14
MINDY4-202ENST00000409881 GPR180Q86V85 440 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 RYBPQ8N488 228 aaPredicted RBP14.17□□□□□ -0.14
MINDY4-202ENST00000409881 ZNF366Q8N895 744 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 SPATA22Q8NHS9 363 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 MGME1Q9BQP7 344 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 PNPLA3Q9NST1 481 aa14.17□□□□□ -0.14
MINDY4-202ENST00000409881 CNOT11Q9UKZ1 510 aaKnown RBP14.17□□□□□ -0.14
MINDY4-202ENST00000409881 FUOMA2VDF0 154 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 TTC34A8MYJ7 566 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 SRPRAP08240 638 aaKnown RBP14.16□□□□□ -0.14
MINDY4-202ENST00000409881 CD72P21854 359 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 SESN2P58004 480 aaPredicted RBP14.16□□□□□ -0.14
MINDY4-202ENST00000409881 GRSF1Q12849 480 aaKnown RBP eCLIP14.16□□□□□ -0.14
MINDY4-202ENST00000409881 PRPSAP1Q14558 356 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 NXNQ6DKJ4 435 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 OGFOD2Q6N063 350 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 OR6K2Q8NGY2 324 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 CDKL2Q92772 493 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 CIB1Q99828 191 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 OSBPL11Q9BXB4 747 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 PCDHAC1Q9H158 963 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 SLC25A51Q9H1U9 297 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 RMI1Q9H9A7 625 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 C20orf96Q9NUD7 363 aaPredicted RBP14.16□□□□□ -0.14
MINDY4-202ENST00000409881 ADA2Q9NZK5 511 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 SLC8A2Q9UPR5 921 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 CXorf51AA0A1B0GTR3 108 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 ADAM23O75077 832 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 ATE1O95260 518 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 VAPBO95292 243 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 MT-CYBP00156 380 aaPredicted RBP14.16□□□□□ -0.14
MINDY4-202ENST00000409881 EGFP01133 1207 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 FUCA1P04066 466 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 OCM2P0CE71 109 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 OCMP0CE72 109 aaPredicted RBP14.16□□□□□ -0.14
MINDY4-202ENST00000409881 GLULP15104 373 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 HOXD12P35452 270 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 CD86P42081 329 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 ZNF234Q14588 700 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 MLF2Q15773 248 aaPredicted RBP14.16□□□□□ -0.14
MINDY4-202ENST00000409881 MTX3Q5HYI7 312 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 EGFLAMQ63HQ2 1017 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 FSTL4Q6MZW2 842 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 Q6ZVU0 165 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 ZBTB46Q86UZ6 589 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 FAM47BQ8NA70 645 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 FAM3CQ92520 227 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 MYO19Q96H55 970 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 FCRL5Q96RD9 977 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 MTG2Q9H4K7 406 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 CLK4Q9HAZ1 481 aaKnown RBP14.16□□□□□ -0.14
MINDY4-202ENST00000409881 SCUBE2Q9NQ36 999 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 FBXL21Q9UKT6 434 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 AP4S1Q9Y587 144 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 SNX13Q9Y5W8 968 aa14.16□□□□□ -0.14
MINDY4-202ENST00000409881 TMEM247A6NEH6 219 aa14.15□□□□□ -0.14
MINDY4-202ENST00000409881 ZNF821O75541 412 aaPredicted RBP14.15□□□□□ -0.14
MINDY4-202ENST00000409881 ERVK-10P10266 1014 aa14.15□□□□□ -0.14
MINDY4-202ENST00000409881 ATP1A4Q13733 1029 aa14.15□□□□□ -0.14
MINDY4-202ENST00000409881 INSCQ1MX18 579 aa14.15□□□□□ -0.14
MINDY4-202ENST00000409881 TMEM196Q5HYL7 178 aa14.15□□□□□ -0.14
MINDY4-202ENST00000409881 XKR5Q6UX68 686 aa14.15□□□□□ -0.14
MINDY4-202ENST00000409881 SERPINA13PQ6UXR4 307 aa14.15□□□□□ -0.14
MINDY4-202ENST00000409881 DCDC5Q6ZRR9 648 aa14.15□□□□□ -0.14
MINDY4-202ENST00000409881 SLC15A3Q8IY34 581 aa14.15□□□□□ -0.14
MINDY4-202ENST00000409881 ARRDC2Q8TBH0 407 aa14.15□□□□□ -0.14
MINDY4-202ENST00000409881 THAP11Q96EK4 314 aa14.15□□□□□ -0.14
MINDY4-202ENST00000409881 IMP4Q96G21 291 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms