RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 KIAA0100Q14667 2235 aaKnown RBP8.25□□□□□ -1.09
SNX13-201ENST00000409076 BPTFQ12830 3046 aa8.25□□□□□ -1.09
SNX13-201ENST00000409076 H3BMQ9 156 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 SCAMP1O15126 338 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 COL6A2P12110 1019 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 ALOX12P18054 663 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 SLC6A2P23975 617 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 CLCN5P51795 746 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 CTBSQ01459 385 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 KYAT1Q16773 422 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 DENND5AQ6IQ26 1287 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 NANOGP8Q6NSW7 305 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 AGMOQ6ZNB7 445 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 ERMP1Q7Z2K6 904 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 NECAB2Q7Z6G3 386 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 CLEC14AQ86T13 490 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 TMEM174Q8WUU8 243 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 ASIC4Q96FT7 647 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 PLEKHA8Q96JA3 519 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 COG8Q96MW5 612 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 HAPLN3Q96S86 360 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 DPH2Q9BQC3 489 aaPredicted RBP8.24□□□□□ -1.09
SNX13-201ENST00000409076 ZBED2Q9BTP6 218 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 TUBB1Q9H4B7 451 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 NANOGQ9H9S0 305 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 PLGRKTQ9HBL7 147 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 VTA1Q9NP79 307 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 EIF2B3Q9NR50 452 aaKnown RBP8.24□□□□□ -1.09
SNX13-201ENST00000409076 MKS1Q9NXB0 559 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 VPS28Q9UK41 221 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 PHIPQ8WWQ0 1821 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 TFECO14948 347 aaPredicted RBP8.24□□□□□ -1.09
SNX13-201ENST00000409076 KPNA5O15131 536 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 DENRO43583 198 aaKnown RBP8.24□□□□□ -1.09
SNX13-201ENST00000409076 VPS26AO75436 327 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 STAU1O95793 577 aaKnown RBP8.24□□□□□ -1.09
SNX13-201ENST00000409076 TCF3P15923 654 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 VARSP26640 1264 aaKnown RBP8.24□□□□□ -1.09
SNX13-201ENST00000409076 ATN1P54259 1190 aaPredicted RBP8.24□□□□□ -1.09
SNX13-201ENST00000409076 NAB1Q13506 487 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 SPANXN4Q5MJ08 99 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 STXBP5Q5T5C0 1151 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 GDF6Q6KF10 455 aaPredicted RBP8.24□□□□□ -1.09
SNX13-201ENST00000409076 GPRIN3Q6ZVF9 776 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 SLC22A9Q8IVM8 553 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 PIANPQ8IYJ0 282 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 OR13J1Q8NGT2 312 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 CCDC28BQ9BUN5 200 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 BOCQ9BWV1 1114 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 CTPS2Q9NRF8 586 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 CRLS1Q9UJA2 301 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 POU2F3Q9UKI9 436 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 SAP18O00422 153 aaKnown RBP8.24□□□□□ -1.09
SNX13-201ENST00000409076 ZSCAN9O15535 394 aaPredicted RBP8.24□□□□□ -1.09
SNX13-201ENST00000409076 FAM20BO75063 409 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 GJA1P17302 382 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 HALP42357 657 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 PPP3CCP48454 512 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 PCYT1AP49585 367 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 CCT8P50990 548 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 OXCT1P55809 520 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 MAPKAPK3Q16644 382 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 C2CD4AQ8NCU7 369 aaPredicted RBP8.24□□□□□ -1.09
SNX13-201ENST00000409076 RPL3LQ92901 407 aaKnown RBP8.24□□□□□ -1.09
SNX13-201ENST00000409076 MED8Q96G25 268 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 MAGED4Q96JG8 741 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 APOLD1Q96LR9 279 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 DMRTB1Q96MA1 342 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 ZYG11BQ9C0D3 744 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 EPB41L1Q9H4G0 881 aa8.24□□□□□ -1.09
SNX13-201ENST00000409076 POLR3BQ9NW08 1133 aaPredicted RBP8.24□□□□□ -1.09
SNX13-201ENST00000409076 COL2A1P02458 1487 aaPredicted RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 F5H5T6 163 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 K7ERQ8 282 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 MGEA5O60502 916 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 S1PR4O95977 384 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 C1QCP02747 245 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 STATHP02808 62 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 RHOCP08134 193 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 IMPDH1P20839 514 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 CDH3P22223 829 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 ARCN1P48444 511 aaKnown RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 ZNF157P51786 506 aaPredicted RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 TPTEP56180 551 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 FAM98BQ52LJ0 330 aaKnown RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 INTS6LQ5JSJ4 861 aaKnown RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 GPR153Q6NV75 609 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 RGMBQ6NW40 437 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 ZNF549Q6P9A3 640 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 DEFB128Q7Z7B8 93 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 CCDC103Q8IW40 242 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 FAM217AQ8IXS0 508 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 C8orf59Q8N0T1 100 aaPredicted RBP8.23□□□□□ -1.09
SNX13-201ENST00000409076 BBS5Q8N3I7 341 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 TOP6BLQ8N6T0 577 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 ZNF540Q8NDQ6 660 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 OR2T12Q8NG77 320 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 SPPL2AQ8TCT8 520 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 AUTS2Q8WXX7 1259 aa8.23□□□□□ -1.09
SNX13-201ENST00000409076 SNX19Q92543 992 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms