RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 ARVCFO00192 962 aa11.77□□□□□ -0.53
PCNX4-204ENST00000406949 ALBP02768 609 aa11.77□□□□□ -0.53
PCNX4-204ENST00000406949 KLKB1P03952 638 aa11.77□□□□□ -0.53
PCNX4-204ENST00000406949 GJA1P17302 382 aa11.77□□□□□ -0.53
PCNX4-204ENST00000406949 XPAP23025 273 aaPredicted RBP11.77□□□□□ -0.53
PCNX4-204ENST00000406949 GSK3BP49841 420 aa11.77□□□□□ -0.53
PCNX4-204ENST00000406949 HMGCS1Q01581 520 aa11.77□□□□□ -0.53
PCNX4-204ENST00000406949 TGFBIQ15582 683 aa11.77□□□□□ -0.53
PCNX4-204ENST00000406949 CLVS1Q8IUQ0 354 aaPredicted RBP11.77□□□□□ -0.53
PCNX4-204ENST00000406949 GFM2Q969S9 779 aaKnown RBP11.77□□□□□ -0.53
PCNX4-204ENST00000406949 PHF12Q96QT6 1004 aa11.77□□□□□ -0.53
PCNX4-204ENST00000406949 MGME1Q9BQP7 344 aa11.77□□□□□ -0.53
PCNX4-204ENST00000406949 DPY30Q9C005 99 aa11.77□□□□□ -0.53
PCNX4-204ENST00000406949 SOX17Q9H6I2 414 aaPredicted RBP11.77□□□□□ -0.53
PCNX4-204ENST00000406949 CPQQ9Y646 472 aa11.77□□□□□ -0.53
PCNX4-204ENST00000406949 NBNO60934 754 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 ESRRBO95718 433 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 MTHFD2P13995 350 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 NR1H2P55055 460 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 NEDD8Q15843 81 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 ADAMTSL2Q86TH1 951 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 MARVELD2Q8N4S9 558 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 C2orf49Q9BVC5 232 aaPredicted RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 FAM126AQ9BYI3 521 aaPredicted RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 CCDC90BQ9GZT6 254 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 HIPK3Q9H422 1215 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 INTS7Q9NVH2 962 aaKnown RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 MARCH5Q9NX47 278 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 LIMD1Q9UGP4 676 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 ZNF232Q9UNY5 417 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 EIF3LQ9Y262 564 aaKnown RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 PDCD11Q14690 1871 aaKnown RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 MAP1BP46821 2468 aaKnown RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 A0A1B0GTW7 788 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 EI24O14681 340 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 HTR6P50406 440 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 INHBCP55103 352 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 CYP4F8P98187 520 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 MYBPC1Q00872 1141 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 PRKCQQ04759 706 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 CHRNB3Q05901 458 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 TRAP1Q12931 704 aaKnown RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 BNIP2Q12982 314 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 EIF4EBP2Q13542 120 aaPredicted RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 TRIM71Q2Q1W2 868 aaKnown RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 POM121L1PQ3SYA9 428 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 TXNDC11Q6PKC3 985 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 B3GNT6Q6ZMB0 384 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 STK40Q8N2I9 435 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 RHEBL1Q8TAI7 183 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 HMGCLL1Q8TB92 370 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 MRPS31Q92665 395 aaKnown RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 C9orf16Q9BUW7 83 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 RNF38Q9H0F5 515 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 ZNF385DQ9H6B1 395 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 ZNF711Q9Y462 761 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 HNRNPRO43390 633 aaKnown RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 ACADVLP49748 655 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 ZNF140P52738 457 aaPredicted RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 PPP1R8Q12972 351 aaKnown RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 PGS1Q32NB8 556 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 LRRC23Q53EV4 343 aaPredicted RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 TMEM214Q6NUQ4 689 aaKnown RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 ANGPTL8Q6UXH0 198 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 DHRSXQ8N5I4 330 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 ITFG1Q8TB96 612 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 GRIN3AQ8TCU5 1115 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 NUDT8Q8WV74 236 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 CCDC138Q96M89 665 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 PRICKLE1Q96MT3 831 aaPredicted RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 BOCQ9BWV1 1114 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 TUBB1Q9H4B7 451 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 LIN28AQ9H9Z2 209 aaKnown RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 ARL15Q9NXU5 204 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 SLAMF8Q9P0V8 285 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 WARS2Q9UGM6 360 aaKnown RBP11.76□□□□□ -0.53
PCNX4-204ENST00000406949 CIDEBQ9UHD4 219 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 IKZF3Q9UKT9 509 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 YIPF1Q9Y548 306 aa11.76□□□□□ -0.53
PCNX4-204ENST00000406949 DYTNA2CJ06 578 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 C7orf72A4D263 438 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 H3BSA7 217 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 TMEM189-UBE2V1I3L0A0 370 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 SOCS2O14508 198 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 CLDN7O95471 211 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 HIST1H2AGP0C0S8 130 aaPredicted RBP11.75□□□□□ -0.53
PCNX4-204ENST00000406949 HIST1H2ADP20671 130 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 GABRR2P28476 465 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 PTGER3P43115 390 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 RECQLP46063 649 aaPredicted RBP11.75□□□□□ -0.53
PCNX4-204ENST00000406949 GTF2H2Q13888 395 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 BTG3Q14201 252 aaPredicted RBP11.75□□□□□ -0.53
PCNX4-204ENST00000406949 CRY1Q16526 586 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 GTF2H2CQ6P1K8 395 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 KLHDC10Q6PID8 442 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 SPATA19Q7Z5L4 167 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 GPR141Q7Z602 305 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 ZNF683Q8IZ20 524 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 HIST1H2AHQ96KK5 128 aa11.75□□□□□ -0.53
PCNX4-204ENST00000406949 CASD1Q96PB1 797 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms