RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 GPR152Q8TDT2 470 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 MYEOVQ96EZ4 313 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 RNF145Q96MT1 663 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 ACOX2Q99424 681 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 SEPHS2Q99611 448 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 C1orf50Q9BV19 199 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 TDRD1Q9BXT4 1180 aaKnown RBP10.62□□□□□ -0.71
CLIP4-204ENST00000404424 INTS7Q9NVH2 962 aaKnown RBP10.62□□□□□ -0.71
CLIP4-204ENST00000404424 TBCCD1Q9NVR7 557 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 NUDT4Q9NZJ9 180 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 CDC14AQ9UNH5 594 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 TNPO3Q9Y5L0 923 aaKnown RBP10.62□□□□□ -0.71
CLIP4-204ENST00000404424 H3BMQ9 156 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 KDELR3O43731 214 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 PRSS23O95084 383 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 SNAP29O95721 258 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 PRLP01236 227 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 ASGR1P07306 291 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 ZDHHC11BP0C7U3 371 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 RAP2AP10114 183 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 STT3AP46977 705 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 SCNN1BP51168 640 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 ALDH3A2P51648 485 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 OXCT1P55809 520 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 RAB15P59190 212 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 CTBSQ01459 385 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 TMED1Q13445 227 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 MRPL58Q14197 206 aaKnown RBP10.61□□□□□ -0.71
CLIP4-204ENST00000404424 PCBP2Q15366 365 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLIP4-204ENST00000404424 TGFBIQ15582 683 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 CTSL3PQ5NE16 218 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 MFSD14CQ5VZR4 134 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 KCTD8Q6ZWB6 473 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 SLC24A5Q71RS6 500 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 OFCC1Q8IZS5 231 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 SIDT2Q8NBJ9 832 aaKnown RBP10.61□□□□□ -0.71
CLIP4-204ENST00000404424 CD200R1Q8TD46 325 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 EEF1AKMT1Q8WVE0 214 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 THAP11Q96EK4 314 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 LINGO1Q96FE5 620 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 COG8Q96MW5 612 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 CDK5RAP1Q96SZ6 601 aaKnown RBP10.61□□□□□ -0.71
CLIP4-204ENST00000404424 POLR1BQ9H9Y6 1135 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 SCUBE2Q9NQ36 999 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 CHD5Q8TDI0 1954 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 MANSC4A6NHS7 340 aaPredicted RBP10.61□□□□□ -0.71
CLIP4-204ENST00000404424 GOLGA8CPA6NN73 597 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 E5RI56 91 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 H7C0S8 307 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 ACSL4O60488 711 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 TLR5O60602 858 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 GMNNO75496 209 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 CPNE6O95741 557 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 ESR1P03372 595 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 MC4RP32245 332 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 PTGER3P43115 390 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 OR4D2P58180 307 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 SMARCB1Q12824 385 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 CBX2Q14781 532 aaPredicted RBP10.61□□□□□ -0.71
CLIP4-204ENST00000404424 FAM98BQ52LJ0 330 aaKnown RBP10.61□□□□□ -0.71
CLIP4-204ENST00000404424 PSAPL1Q6NUJ1 521 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 SCIMPQ6UWF3 145 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 DLEU7Q6UYE1 221 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 STK40Q8N2I9 435 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 TTC9BQ8N6N2 239 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 CDYL2Q8N8U2 506 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 OR7D4Q8NG98 312 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 OR8J3Q8NGG0 315 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 PDLIM5Q96HC4 596 aaKnown RBP10.61□□□□□ -0.71
CLIP4-204ENST00000404424 RDH12Q96NR8 316 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 FAM193BQ96PV7 902 aaPredicted RBP10.61□□□□□ -0.71
CLIP4-204ENST00000404424 PHF12Q96QT6 1004 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 CGREF1Q99674 301 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 SYT17Q9BSW7 474 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 ADGRE3Q9BY15 652 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 EIF2B4Q9UI10 523 aaKnown RBP10.61□□□□□ -0.71
CLIP4-204ENST00000404424 PRG3Q9Y2Y8 225 aaPredicted RBP10.61□□□□□ -0.71
CLIP4-204ENST00000404424 HEMK1Q9Y5R4 338 aaPredicted RBP10.61□□□□□ -0.71
CLIP4-204ENST00000404424 ST14Q9Y5Y6 855 aa10.61□□□□□ -0.71
CLIP4-204ENST00000404424 hCG_2014768A0A024R1R8 64 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 NOL3O60936 208 aaKnown RBP10.6□□□□□ -0.71
CLIP4-204ENST00000404424 ADAMTS4O75173 837 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 NIPSNAP2O75323 286 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 ATE1O95260 518 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 HPRP00739 348 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 ANXA6P08133 673 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 JUNBP17275 347 aaPredicted RBP10.6□□□□□ -0.71
CLIP4-204ENST00000404424 RGRP47804 291 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 ENTPD1P49961 510 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 ARSFP54793 590 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 ERVPABLB-1P60509 514 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 EPS8Q12929 822 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 PWP1Q13610 501 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 CLLU1OSQ5K130 101 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 GPR107Q5VW38 600 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 SLC2A7Q6PXP3 512 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 GALNT13Q8IUC8 556 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 PIANPQ8IYJ0 282 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 CFAP52Q8N1V2 620 aa10.6□□□□□ -0.71
CLIP4-204ENST00000404424 SFRP1Q8N474 314 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms