RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 SPTAN1Q13813 2472 aaKnown RBP12.16□□□□□ -0.46
PRAME-204ENST00000403441 A0A0U1RQJ8 604 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 CCDC66A2RUB6 948 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 GRID2IPA4D2P6 1211 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 CLEC18AA5D8T8 446 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 ANKRD66B4E2M5 251 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 KATNA1O75449 491 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 RFPL1O75677 317 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 ZRANB2O95218 330 aaKnown RBP eCLIP12.15□□□□□ -0.465e-12■□□□□ 8.8
PRAME-204ENST00000403441 SLC4A1P02730 911 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 MMP2P08253 660 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 CCNYL3P0C7X3 344 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 TYRP1P17643 537 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 XRCC1P18887 633 aaPredicted RBP12.15□□□□□ -0.46
PRAME-204ENST00000403441 CD86P42081 329 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 SEPHS1P49903 392 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 DCDC1P59894 354 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 COPS2P61201 443 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 NIPAL4Q0D2K0 466 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 ERV3-1Q14264 604 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 PRKD1Q15139 912 aaPredicted RBP12.15□□□□□ -0.46
PRAME-204ENST00000403441 SLC14A2Q15849 920 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 PLA2G4EQ3MJ16 856 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 ALS2CLQ60I27 953 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 CLEC18BQ6UXF7 455 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 NPNTQ6UXI9 565 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 TMEM26Q6ZUK4 368 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 NT5DC3Q86UY8 548 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 CCDC13Q8IYE1 715 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 RCOR2Q8IZ40 523 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 TEX19Q8NA77 164 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 CLEC18CQ8NCF0 446 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 TADA1Q96BN2 335 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 OR6C1Q96RD1 312 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 ZNF768Q9H5H4 540 aaKnown RBP12.15□□□□□ -0.46
PRAME-204ENST00000403441 ZFYVE1Q9HBF4 777 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 TRIM39Q9HCM9 518 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 ARFGAP3Q9NP61 516 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 LNPEPQ9UIQ6 1025 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 MAN2B2Q9Y2E5 1009 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 ADGRG1Q9Y653 693 aa12.15□□□□□ -0.46
PRAME-204ENST00000403441 USP9XQ93008 2570 aaPredicted RBP12.15□□□□□ -0.47
PRAME-204ENST00000403441 KMOO15229 486 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 KIAA0754O94854 1291 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 MT-ND3P03897 115 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 PECAM1P16284 738 aaPredicted RBP12.14□□□□□ -0.47
PRAME-204ENST00000403441 ZNF28P17035 718 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 VCLP18206 1134 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 CAPZBP47756 277 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 ZBTB17Q13105 803 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 TFDP2Q14188 446 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 GALNT3Q14435 633 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 PDK1Q15118 436 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 SEPT7Q16181 437 aaKnown RBP12.14□□□□□ -0.47
PRAME-204ENST00000403441 ZFYVE27Q5T4F4 411 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 PDPK2PQ6A1A2 396 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 TCTN3Q6NUS6 607 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 ZNF662Q6ZS27 426 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 ASB18Q6ZVZ8 466 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 BBS12Q6ZW61 710 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 PRSS42Q7Z5A4 293 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 LRRTM4Q86VH4 590 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 RFX6Q8HWS3 928 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 RBM12BQ8IXT5 1001 aaKnown RBP12.14□□□□□ -0.47
PRAME-204ENST00000403441 TXLNBQ8N3L3 684 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 ALG3Q92685 438 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 GLYATL1Q969I3 302 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 MIB2Q96AX9 1013 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 ZDHHC12Q96GR4 267 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 RBM41Q96IZ5 413 aaKnown RBP12.14□□□□□ -0.47
PRAME-204ENST00000403441 ELMO2Q96JJ3 720 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 TIMM29Q9BSF4 260 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 DESI2Q9BSY9 194 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 TWSG1Q9GZX9 223 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 POT1Q9NUX5 634 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 OGFRQ9NZT2 677 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 TRIM10Q9UDY6 481 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 DNAJC16Q9Y2G8 782 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.14□□□□□ -0.47
PRAME-204ENST00000403441 HEY1Q9Y5J3 304 aa12.14□□□□□ -0.47
PRAME-204ENST00000403441 SPTBN1Q01082 2364 aaKnown RBP12.13□□□□□ -0.47
PRAME-204ENST00000403441 ZNF106Q9H2Y7 1883 aaKnown RBP12.13□□□□□ -0.47
PRAME-204ENST00000403441 CDC14CA4D256 554 aa12.13□□□□□ -0.47
PRAME-204ENST00000403441 GOLGA6L6A8MZA4 724 aa12.13□□□□□ -0.47
PRAME-204ENST00000403441 KCNK1O00180 336 aa12.13□□□□□ -0.47
PRAME-204ENST00000403441 PPP1R12AO14974 1030 aaPredicted RBP12.13□□□□□ -0.47
PRAME-204ENST00000403441 CHUKO15111 745 aa12.13□□□□□ -0.47
PRAME-204ENST00000403441 MTSS1O43312 755 aa12.13□□□□□ -0.47
PRAME-204ENST00000403441 VEGFDO43915 354 aa12.13□□□□□ -0.47
PRAME-204ENST00000403441 CST8O60676 142 aa12.13□□□□□ -0.47
PRAME-204ENST00000403441 JCHAINP01591 159 aa12.13□□□□□ -0.47
PRAME-204ENST00000403441 ZNF7P17097 686 aaPredicted RBP12.13□□□□□ -0.47
PRAME-204ENST00000403441 NR1D1P20393 614 aa12.13□□□□□ -0.47
PRAME-204ENST00000403441 F8A1P23610 371 aa12.13□□□□□ -0.47
PRAME-204ENST00000403441 LEPRP48357 1165 aaKnown RBP12.13□□□□□ -0.47
PRAME-204ENST00000403441 PMS2P54278 862 aa12.13□□□□□ -0.47
PRAME-204ENST00000403441 SH3BP2P78314 561 aa12.13□□□□□ -0.47
PRAME-204ENST00000403441 KIF5AQ12840 1032 aa12.13□□□□□ -0.47
PRAME-204ENST00000403441 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.13□□□□□ -0.47
PRAME-204ENST00000403441 ZNF648Q5T619 568 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms