RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 SOBPA7XYQ1 873 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 ANGPT2O15123 496 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 NOBOXO60393 691 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 OAZ2O95190 189 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 IDO1P14902 403 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 CAPGP40121 348 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 DSC1Q08554 894 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 INPP5AQ14642 412 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 UNC50Q53HI1 259 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 TMEM236Q5W0B7 351 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 DCP1BQ8IZD4 617 aaKnown RBP13.97□□□□□ -0.17
ATG3-202ENST00000402314 CLEC4FQ8N1N0 589 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 C1orf74Q96LT6 269 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 CCDC138Q96M89 665 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 FAM193BQ96PV7 902 aaPredicted RBP13.97□□□□□ -0.17
ATG3-202ENST00000402314 ALPK1Q96QP1 1244 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 EHD1Q9H4M9 534 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.97□□□□□ -0.17
ATG3-202ENST00000402314 POLR3BQ9NW08 1133 aaPredicted RBP13.97□□□□□ -0.17
ATG3-202ENST00000402314 ZNF229Q9UJW7 825 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 PNMA8BQ9ULN7 279 aaPredicted RBP13.97□□□□□ -0.17
ATG3-202ENST00000402314 PCDHB5Q9Y5E4 795 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 FAM155AB1AL88 458 aaPredicted RBP13.97□□□□□ -0.17
ATG3-202ENST00000402314 SNAP91O60641 907 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 LINC00032P0C843 101 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 SLC2A3P11169 496 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 BMP1P13497 986 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 RPL17P18621 184 aaKnown RBP13.97□□□□□ -0.17
ATG3-202ENST00000402314 TGFBR1P36897 503 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 PLA2G16P53816 162 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 RPS24P62847 133 aaKnown RBP13.97□□□□□ -0.17
ATG3-202ENST00000402314 LAPTM5Q13571 262 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 DGCR6Q14129 220 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 MEP1AQ16819 746 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 CRTC3Q6UUV7 619 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 TAS1R1Q7RTX1 841 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 R3HCC1LQ7Z5L2 792 aaKnown RBP13.97□□□□□ -0.17
ATG3-202ENST00000402314 STK32CQ86UX6 486 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 LGI2Q8N0V4 545 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 ELMO1Q92556 727 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 CENPNQ96H22 339 aaPredicted RBP13.97□□□□□ -0.17
ATG3-202ENST00000402314 C9orf16Q9BUW7 83 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 SEZ6LQ9BYH1 1024 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 AKTIPQ9H8T0 292 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 ATAD3AQ9NVI7 634 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 PCDH10Q9P2E7 1040 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 GALPQ9UBC7 116 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 GNPTGQ9UJJ9 305 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 SPO11Q9Y5K1 396 aa13.97□□□□□ -0.17
ATG3-202ENST00000402314 TMEM88BA6NKF7 163 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 CD3EAPO15446 510 aaKnown RBP13.96□□□□□ -0.17
ATG3-202ENST00000402314 TSPAN3O60637 253 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 ALBP02768 609 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 AGXTP21549 392 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 DNAJB13P59910 316 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 ZNF235Q14590 738 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 INAVAQ3KP66 663 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 CCSAPQ6IQ19 270 aaPredicted RBP13.96□□□□□ -0.17
ATG3-202ENST00000402314 KIAA0408Q6ZU52 694 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 ADGRG5Q8IZF4 528 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 ABI1Q8IZP0 508 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 CALML6Q8TD86 181 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 TRPC4APQ8TEL6 797 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 UROC1Q96N76 676 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 ZBED2Q9BTP6 218 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 C1orf50Q9BV19 199 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 H0YJX3 145 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 VNN2O95498 520 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 HSPA1AP0DMV8 641 aaKnown RBP13.96□□□□□ -0.17
ATG3-202ENST00000402314 HSPA1BP0DMV9 641 aaKnown RBP13.96□□□□□ -0.17
ATG3-202ENST00000402314 TCF3P15923 654 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 FMO4P31512 558 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 SEPHS1P49903 392 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 CCT8P50990 548 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 TRAP1Q12931 704 aaKnown RBP13.96□□□□□ -0.17
ATG3-202ENST00000402314 SERINC3Q13530 473 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 ACAP2Q15057 778 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 ZNF678Q5SXM1 525 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 MSANTD2Q6P1R3 559 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 PRSS55Q6UWB4 352 aaPredicted RBP13.96□□□□□ -0.17
ATG3-202ENST00000402314 SLC24A5Q71RS6 500 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 CCDC80Q76M96 950 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 TRUB1Q8WWH5 349 aaKnown RBP13.96□□□□□ -0.17
ATG3-202ENST00000402314 STARD8Q92502 1023 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 BTN2A3PQ96KV6 586 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 FUNDC2Q9BWH2 189 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 SMURF2Q9HAU4 748 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 MID1IP1Q9NPA3 183 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 RNF186Q9NXI6 227 aa13.96□□□□□ -0.17
ATG3-202ENST00000402314 KIAA1522Q9P206 1035 aaPredicted RBP13.96□□□□□ -0.17
ATG3-202ENST00000402314 DOCK4Q8N1I0 1966 aa13.96□□□□□ -0.18
ATG3-202ENST00000402314 WASH4PA8MWX3 477 aa13.96□□□□□ -0.18
ATG3-202ENST00000402314 SLC7A4O43246 635 aa13.96□□□□□ -0.18
ATG3-202ENST00000402314 TLR5O60602 858 aa13.96□□□□□ -0.18
ATG3-202ENST00000402314 INMTO95050 263 aa13.96□□□□□ -0.18
ATG3-202ENST00000402314 RBP1P09455 135 aa13.96□□□□□ -0.18
ATG3-202ENST00000402314 SLC6A4P31645 630 aa13.96□□□□□ -0.18
ATG3-202ENST00000402314 DIO3P55073 304 aa13.96□□□□□ -0.18
ATG3-202ENST00000402314 SLCO6A1Q86UG4 719 aa13.96□□□□□ -0.18
ATG3-202ENST00000402314 ATP6V0D2Q8N8Y2 350 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms