RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CHIT1Q13231 466 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 ZBTB46Q86UZ6 589 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 FCRL5Q96RD9 977 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 LMAN2LQ9H0V9 348 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 FADS3Q9Y5Q0 445 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 PIP5K1BO14986 540 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 CAP1Q01518 475 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 ZSWIM7Q19AV6 140 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 ATAT1Q5SQI0 421 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 KLHL17Q6TDP4 642 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 ZHX1-C8orf76Q96EF9 292 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 SEMA3GQ9NS98 782 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 H0YC42 278 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 SEC24AO95486 1093 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 ZBTB11O95625 1053 aaPredicted RBP18.02■□□□□ 0.48
COL18A1-204ENST00000400337 SEMG2Q02383 582 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 DPYSQ14117 519 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 DDI2Q5TDH0 399 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 XAGE5Q8WWM1 108 aa18.02■□□□□ 0.48
COL18A1-204ENST00000400337 DENND2DQ9H6A0 471 aaPredicted RBP18.02■□□□□ 0.48
COL18A1-204ENST00000400337 KNDC1Q76NI1 1749 aa18.02■□□□□ 0.47
COL18A1-204ENST00000400337 MFN2O95140 757 aa18.02■□□□□ 0.47
COL18A1-204ENST00000400337 OGNP20774 298 aaKnown RBP18.02■□□□□ 0.47
COL18A1-204ENST00000400337 SLC20A2Q08357 652 aa18.02■□□□□ 0.47
COL18A1-204ENST00000400337 PPIGQ13427 754 aaKnown RBP eCLIP18.02■□□□□ 0.472e-17■■■□□ 16.2
COL18A1-204ENST00000400337 LRRC73Q5JTD7 316 aa18.02■□□□□ 0.47
COL18A1-204ENST00000400337 PLEKHG4BQ96PX9 1271 aa18.02■□□□□ 0.47
COL18A1-204ENST00000400337 TEFMQ96QE5 360 aaKnown RBP18.02■□□□□ 0.47
COL18A1-204ENST00000400337 ABCB8Q9NUT2 735 aa18.02■□□□□ 0.47
COL18A1-204ENST00000400337 MRPS33Q9Y291 106 aaKnown RBP18.02■□□□□ 0.47
COL18A1-204ENST00000400337 EME2A4GXA9 379 aaPredicted RBP18.01■□□□□ 0.47
COL18A1-204ENST00000400337 GDF6Q6KF10 455 aaPredicted RBP18.01■□□□□ 0.47
COL18A1-204ENST00000400337 PTCHD4Q6ZW05 846 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 DUOX1Q9NRD9 1551 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 ELOVL7A1L3X0 281 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 DNM1LO00429 736 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 MT-ND1P03886 318 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 ZNF132P52740 706 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 FLCNQ8NFG4 579 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 RAD51AP1Q96B01 352 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 MRPL39Q9NYK5 338 aaKnown RBP18.01■□□□□ 0.47
COL18A1-204ENST00000400337 CACNA1FO60840 1977 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 ACRP10323 421 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 KLHL12Q53G59 568 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 GALNT5Q7Z7M9 940 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 ADGRG2Q8IZP9 1017 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 MOSPD2Q8NHP6 518 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 PLEKHO2Q8TD55 490 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 ADAMTS15Q8TE58 950 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 EXD2Q9NVH0 621 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 CNTN3Q9P232 1028 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 MED22Q15528 200 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 SNAP47Q5SQN1 464 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 SULT1C3Q6IMI6 304 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 FAM220AQ7Z4H9 259 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 OSBPL7Q9BZF2 842 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 SEC14L3Q9UDX4 400 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 FETUBQ9UGM5 382 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 RSL24D1Q9UHA3 163 aaKnown RBP18.01■□□□□ 0.47
COL18A1-204ENST00000400337 MRPS7Q9Y2R9 242 aaKnown RBP18.01■□□□□ 0.47
COL18A1-204ENST00000400337 SLC25A12O75746 678 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 HLA-DQB2P05538 268 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 HOXD13P35453 343 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 DGKGP49619 791 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 CLK3P49761 638 aaKnown RBP18.01■□□□□ 0.47
COL18A1-204ENST00000400337 IRF9Q00978 393 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 HFE2Q6ZVN8 426 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 CROCCP3Q8IVE0 287 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 OR13C4Q8NGS5 318 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 NPLOC4Q8TAT6 608 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 TRIT1Q9H3H1 467 aaKnown RBP18.01■□□□□ 0.47
COL18A1-204ENST00000400337 GKN1Q9NS71 199 aa18.01■□□□□ 0.47
COL18A1-204ENST00000400337 FAM149AA5PLN7 773 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 OR51F1A6NGY5 319 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 FOXN2P32314 431 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 MED27Q6P2C8 311 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 TMEM220Q6QAJ8 160 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 GALNT13Q8IUC8 556 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 SHISA4Q96DD7 197 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 UNC93B1Q9H1C4 597 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 CCDC177Q9NQR7 707 aaPredicted RBP18■□□□□ 0.47
COL18A1-204ENST00000400337 COL14A1Q05707 1796 aaKnown RBP18■□□□□ 0.47
COL18A1-204ENST00000400337 DLG5Q8TDM6 1919 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18■□□□□ 0.47
COL18A1-204ENST00000400337 NPHS1O60500 1241 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 UGT2B17O75795 530 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 MZT2AQ6P582 158 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 KBTBD8Q8NFY9 601 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 EXOSC8Q96B26 276 aaKnown RBP18■□□□□ 0.47
COL18A1-204ENST00000400337 ALG2Q9H553 416 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 ZNF358Q9NW07 568 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 CRNNQ9UBG3 495 aaPredicted RBP18■□□□□ 0.47
COL18A1-204ENST00000400337 MAP4K5Q9Y4K4 846 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 KCPQ6ZWJ8 1503 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 LRRC14BA6NHZ5 514 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 HCRTO43612 131 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 VIPP01282 170 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 CDH5P33151 784 aaPredicted RBP18■□□□□ 0.47
COL18A1-204ENST00000400337 CSKP41240 450 aa18■□□□□ 0.47
COL18A1-204ENST00000400337 GALNT18Q6P9A2 607 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms