RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PCED1BQ96HM7 432 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 GFM1Q96RP9 751 aaKnown RBP13.64□□□□□ -0.23
VAPA-202ENST00000400000 GSDMCQ9BYG8 508 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 L2HGDHQ9H9P8 463 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 GLOD4Q9HC38 313 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 LDB2O43679 373 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 IFNGP01579 166 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 CMPK1P30085 196 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 GRM5P41594 1212 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 GBE1Q04446 702 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 SMCO1Q147U7 214 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 ARSIQ5FYB1 569 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 SLC17A6Q9P2U8 582 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 RGS17Q9UGC6 210 aaPredicted RBP13.64□□□□□ -0.23
VAPA-202ENST00000400000 HAT1O14929 419 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 CCNDBP1O95273 360 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 SPAM1P38567 509 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 RPIAP49247 311 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 DRG2P55039 364 aaKnown RBP13.64□□□□□ -0.23
VAPA-202ENST00000400000 PPIGQ13427 754 aaKnown RBP eCLIP13.64□□□□□ -0.23
VAPA-202ENST00000400000 GALNT7Q86SF2 657 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 XYLT1Q86Y38 959 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 SCAMP5Q8TAC9 235 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 TWIST2Q8WVJ9 160 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 PSMG2Q969U7 264 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 CHIAQ9BZP6 476 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 PARPBPQ9NWS1 579 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 CORO2BQ9UQ03 480 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 C15orf38-AP3S2A0A0A6YYH1 394 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 NFATC1O95644 943 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 C8AP07357 584 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 CYP3A5P20815 502 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 RIPK1Q13546 671 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 GTF2H2Q13888 395 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 GTF2H2CQ6P1K8 395 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 ARPINQ7Z6K5 226 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 SERPINA9Q86WD7 417 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 COQ8BQ96D53 544 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 ARHGAP9Q9BRR9 750 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 EXD2Q9NVH0 621 aa13.64□□□□□ -0.23
VAPA-202ENST00000400000 NWD1Q149M9 1564 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 A0A1W2PRG6 482 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 TRAPPC6AO75865 159 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 ANXA4P09525 319 aaPredicted RBP13.63□□□□□ -0.23
VAPA-202ENST00000400000 SPATA31C1P0DKV0 1188 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 POLR2JP52435 117 aaKnown RBP13.63□□□□□ -0.23
VAPA-202ENST00000400000 SLC24A5Q71RS6 500 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 CNPY4Q8N129 248 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 PRELID2Q8N945 189 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 MFSD14AQ96MC6 490 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 PCDHB18PQ96TA0 734 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 TBC1D17Q9HA65 648 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 CDH7Q9ULB5 785 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 RAP2CQ9Y3L5 183 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 TCRBV7S2A1N4TA0A589 114 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 EIF1AYO14602 144 aaKnown RBP13.63□□□□□ -0.23
VAPA-202ENST00000400000 ARF3P61204 181 aaPredicted RBP13.63□□□□□ -0.23
VAPA-202ENST00000400000 ARF1P84077 181 aaKnown RBP13.63□□□□□ -0.23
VAPA-202ENST00000400000 GPM6BQ13491 265 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 SPATC1Q76KD6 591 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 CCDC54Q8NEL0 328 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 CIB1Q99828 191 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 SLC39A8Q9C0K1 460 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 OR2AG1Q9H205 316 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 IPPKQ9H8X2 491 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 LOC110117498-PIK3R3F6TDL0 507 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 LAMP2P13473 410 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 CAP1Q01518 475 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 TUSC3Q13454 348 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 KLHL35Q6PF15 583 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 ANKFN1Q8N957 763 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 FAM156AQ8NDB6 213 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 CSPG4P5Q96PW8 444 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 FAM129BQ96TA1 746 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 ZNF670Q9BS34 389 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 TMEM27Q9HBJ8 222 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 NOMO1Q15155 1222 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 TEAD4Q15561 434 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 C1orf94Q6P1W5 598 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 BRSK1Q8TDC3 778 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 RBM18Q96H35 190 aaKnown RBP13.63□□□□□ -0.23
VAPA-202ENST00000400000 SPATA9Q9BWV2 254 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 COPS7AQ9UBW8 275 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 C3orf18Q9UK00 162 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 PMF1-BGLAPU3KQ54 211 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 E7ENQ6 273 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 SERPINA3P01011 423 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 FGF1P05230 155 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 AZGP1P25311 298 aaKnown RBP13.63□□□□□ -0.23
VAPA-202ENST00000400000 RPL10P27635 214 aaKnown RBP13.63□□□□□ -0.23
VAPA-202ENST00000400000 CCND3P30281 292 aaPredicted RBP13.63□□□□□ -0.23
VAPA-202ENST00000400000 CCR10P46092 362 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 AP2S1P53680 142 aaPredicted RBP13.63□□□□□ -0.23
VAPA-202ENST00000400000 RGS8P57771 180 aaPredicted RBP13.63□□□□□ -0.23
VAPA-202ENST00000400000 SH3PXD2AQ5TCZ1 1133 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 NEK5Q6P3R8 708 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 ARMC10Q8N2F6 343 aa13.63□□□□□ -0.23
VAPA-202ENST00000400000 ZNF557Q8N988 423 aaPredicted RBP13.63□□□□□ -0.23
VAPA-202ENST00000400000 PTCD3Q96EY7 689 aaKnown RBP13.63□□□□□ -0.23
VAPA-202ENST00000400000 BTN2A3PQ96KV6 586 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms