RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 ZFP36L2P47974 494 aaKnown RBP13.54□□□□□ -0.24
PTPN6-202ENST00000399448 POLR2JP52435 117 aaKnown RBP13.54□□□□□ -0.24
PTPN6-202ENST00000399448 PCBP2Q15366 365 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTPN6-202ENST00000399448 TBCELQ5QJ74 424 aa13.54□□□□□ -0.24
PTPN6-202ENST00000399448 C6orf136Q5SQH8 315 aa13.54□□□□□ -0.24
PTPN6-202ENST00000399448 ATXN7L2Q5T6C5 722 aaPredicted RBP13.54□□□□□ -0.24
PTPN6-202ENST00000399448 LYSMD3Q7Z3D4 306 aa13.54□□□□□ -0.24
PTPN6-202ENST00000399448 CDYL2Q8N8U2 506 aa13.54□□□□□ -0.24
PTPN6-202ENST00000399448 PIH1D2Q8WWB5 315 aa13.54□□□□□ -0.24
PTPN6-202ENST00000399448 VPS33AQ96AX1 596 aa13.54□□□□□ -0.24
PTPN6-202ENST00000399448 EID2BQ96D98 161 aa13.54□□□□□ -0.24
PTPN6-202ENST00000399448 ALG14Q96F25 216 aa13.54□□□□□ -0.24
PTPN6-202ENST00000399448 PRPF18Q99633 342 aaKnown RBP13.54□□□□□ -0.24
PTPN6-202ENST00000399448 EGFL7Q9UHF1 273 aa13.54□□□□□ -0.24
PTPN6-202ENST00000399448 RNF11Q9Y3C5 154 aa13.54□□□□□ -0.24
PTPN6-202ENST00000399448 FAM234BA2RU67 622 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 ASPDHA6ND91 283 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 SYNCRIPO60506 623 aaKnown RBP13.53□□□□□ -0.24
PTPN6-202ENST00000399448 ZNF7P17097 686 aaPredicted RBP13.53□□□□□ -0.24
PTPN6-202ENST00000399448 PSMA4P25789 261 aaKnown RBP13.53□□□□□ -0.24
PTPN6-202ENST00000399448 CSKP41240 450 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 APOFQ13790 326 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 ADRM1Q16186 407 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 PTRHD1Q6GMV3 140 aaKnown RBP13.53□□□□□ -0.24
PTPN6-202ENST00000399448 FRA10AC1Q70Z53 315 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 ADAMTSL2Q86TH1 951 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 CARM1Q86X55 608 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 TMEM199Q8N511 208 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 PACRGLQ8N7B6 248 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 DCAF4L2Q8NA75 395 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 OR52B6Q8NGF0 335 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 MYO19Q96H55 970 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 SLC45A3Q96JT2 553 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 VCX3AQ9NNX9 186 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 SUN2Q9UH99 717 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 AURKCQ9UQB9 309 aa13.53□□□□□ -0.24
PTPN6-202ENST00000399448 GFRA2O00451 464 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 ARPC2O15144 300 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 PQBP1O60828 265 aaKnown RBP13.52□□□□□ -0.24
PTPN6-202ENST00000399448 BAIAP3O94812 1187 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 NPPAP01160 153 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 S100BP04271 92 aaPredicted RBP13.52□□□□□ -0.24
PTPN6-202ENST00000399448 CKMT2P17540 419 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 RPS3P23396 243 aaKnown RBP eCLIP13.52□□□□□ -0.24
PTPN6-202ENST00000399448 GSK3BP49841 420 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 CCL23P55773 120 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 SH3BGRP55822 239 aaPredicted RBP13.52□□□□□ -0.24
PTPN6-202ENST00000399448 YBX1P67809 324 aaKnown RBP13.52□□□□□ -0.24
PTPN6-202ENST00000399448 CDH18Q13634 790 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 ATP6AP1LQ52LC2 224 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 PAGE3Q5JUK9 113 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 ISLR2Q6UXK2 745 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.52□□□□□ -0.24
PTPN6-202ENST00000399448 Q6ZSR9 355 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 TMEM150AQ86TG1 271 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 PTRH1Q86Y79 214 aaKnown RBP13.52□□□□□ -0.24
PTPN6-202ENST00000399448 FNDC5Q8NAU1 212 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 DNAJB14Q8TBM8 379 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 METTL6Q8TCB7 284 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 C19orf43Q9BQ61 176 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 TMEM79Q9BSE2 394 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 CLPBQ9H078 707 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 ST14Q9Y5Y6 855 aa13.52□□□□□ -0.24
PTPN6-202ENST00000399448 DYTNA2CJ06 578 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 PRRG1O14668 218 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 GPR39O43194 453 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 HTRA2O43464 458 aaPredicted RBP13.52□□□□□ -0.25
PTPN6-202ENST00000399448 GREM1O60565 184 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 OR6B1O95007 311 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 GPIP06744 558 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 ALPIP09923 528 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 ATP6V1B1P15313 513 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 FASP25445 335 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 APLP1P51693 650 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 EEFSECP57772 596 aaKnown RBP13.52□□□□□ -0.25
PTPN6-202ENST00000399448 LIPEQ05469 1076 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 RAB33AQ14088 237 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 SLC5A9Q2M3M2 681 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 INTS11Q5TA45 600 aaKnown RBP13.52□□□□□ -0.25
PTPN6-202ENST00000399448 LETMD1Q6P1Q0 360 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 SBSNQ6UWP8 590 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 SERPINA9Q86WD7 417 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 CAMK1DQ8IU85 385 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 ADGRG5Q8IZF4 528 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 MYO1HQ8N1T3 1032 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 CHCHD4Q8N4Q1 142 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 GRIN3AQ8TCU5 1115 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 CAPNS2Q96L46 248 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 CDK15Q96Q40 435 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 SH3GL3Q99963 347 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 C1orf50Q9BV19 199 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 ALG2Q9H553 416 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 AGPAT4Q9NRZ5 378 aa13.52□□□□□ -0.25
PTPN6-202ENST00000399448 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.51□□□□□ -0.25
PTPN6-202ENST00000399448 GRXCR2A6NFK2 248 aa13.51□□□□□ -0.25
PTPN6-202ENST00000399448 K7ERQ8 282 aa13.51□□□□□ -0.25
PTPN6-202ENST00000399448 SOCS2O14508 198 aa13.51□□□□□ -0.25
PTPN6-202ENST00000399448 SCAMP3O14828 347 aaKnown RBP13.51□□□□□ -0.25
PTPN6-202ENST00000399448 RAD51BO15315 384 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms