RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 RTL4Q6ZR62 310 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 PIGWQ7Z7B1 504 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 ECHDC2Q86YB7 292 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 AQP12AQ8IXF9 295 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 TNS4Q8IZW8 715 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 OXR1Q8N573 874 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 HAPLN3Q96S86 360 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 CDADC1Q9BWV3 514 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 TTYH3Q9C0H2 523 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 ERVK-5Q9HDB9 667 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 FBXW11Q9UKB1 542 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 CNTN6Q9UQ52 1028 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 FKTNO75072 461 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 EOMESO95936 686 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 SELPP16109 830 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 ARF4P18085 180 aaPredicted RBP8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 CD247P20963 164 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 DDX6P26196 483 aaKnown RBP eCLIP8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 TM4SF1P30408 202 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 SMAD3P84022 425 aaKnown RBP8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 PUDPQ08623 228 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 MYBPC3Q14896 1274 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 QPCTQ16769 361 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 CNSTQ6PJW8 725 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 MEIOBQ8N635 442 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 SNIP1Q8TAD8 396 aaKnown RBP8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 CAMK1GQ96NX5 476 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 HTATIP2Q9BUP3 242 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 FKBP14Q9NWM8 211 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 CNTN3Q9P232 1028 aa8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 GNEQ9Y223 722 aaKnown RBP8.29□□□□□ -1.08
SPTLC3-201ENST00000399002 A0A1B0GVM2 712 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 TCAF2A6NFQ2 919 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 OR5F1O95221 314 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 ITGB5P18084 799 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 ADNP2Q6IQ32 1131 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 AMIGO2Q86SJ2 522 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 P2RY8Q86VZ1 359 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 SPPL2CQ8IUH8 684 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 SLC34A3Q8N130 599 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 ALG3Q92685 438 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 C8orf48Q96LL4 319 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 MECRQ9BV79 373 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 COMMD4Q9H0A8 199 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 COL14A1Q05707 1796 aaKnown RBP8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 H3BM21 787 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 PITPNM1O00562 1244 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 PLIN3O60664 434 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 TIPRLO75663 272 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 POP4O95707 220 aaKnown RBP8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 PIGRP01833 764 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 GIMD1P0DJR0 217 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 IL18R1Q13478 541 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 IL18Q14116 193 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 IFI44LQ53G44 452 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 PRR23CQ6ZRP0 262 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 SLITRK4Q8IW52 837 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 RBM15BQ8NDT2 890 aaKnown RBP8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 ZNF563Q8TA94 476 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 UFD1Q92890 307 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 RUVBL1Q9Y265 456 aaKnown RBP8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 NPPAP01160 153 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 CTPS1P17812 591 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 CBX5P45973 191 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 MAPK10P53779 464 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 BLMHQ13867 455 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 FAM110CQ1W6H9 321 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 CRY2Q49AN0 593 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 RBM20Q5T481 1227 aaKnown RBP8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 LRRC70Q7Z2Q7 622 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 DPF3Q92784 378 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 COL26A1Q96A83 441 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 FCRL4Q96PJ5 515 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 PHF12Q96QT6 1004 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 GPC6Q9Y625 555 aaPredicted RBP8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 AKAP12Q02952 1782 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 ABHD14A-ACY1A0A1B0GW23 586 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 METTL21EPA6NDL7 271 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 MAGEB17A8MXT2 336 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 LYNP07948 512 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 CORO1AP31146 461 aaKnown RBP8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 CD52P31358 61 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 KCNA10Q16322 511 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 ZFP69Q49AA0 526 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 KCTD21Q4G0X4 260 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 LIN52Q52LA3 116 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 CPNE9Q8IYJ1 553 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 KBTBD7Q8WVZ9 684 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 KCTD13Q8WZ19 329 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 ELMO3Q96BJ8 720 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 SPACA7Q96KW9 195 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 RETREG1Q9H6L5 497 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 NOCTQ9UK39 431 aaKnown RBP8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 GMEB1Q9Y692 573 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 ZNF99A8MXY4 864 aaPredicted RBP8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 IRAK2O43187 625 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 LRCH4O75427 683 aa8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 DDNO94850 711 aaPredicted RBP8.28□□□□□ -1.08
SPTLC3-201ENST00000399002 MNDAP41218 407 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms