RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 TMEM236Q5W0B7 351 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 FUT10Q6P4F1 479 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 CCDC81Q6ZN84 652 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 LIMS2Q7Z4I7 341 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 UBE2Q1Q7Z7E8 422 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 NAT16Q8N8M0 369 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 NDNFQ8TB73 568 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 HDAC2Q92769 488 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 ZNF669Q96BR6 464 aaPredicted RBP10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 LRCH3Q96II8 777 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 SPATA17Q96L03 361 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 SUSD3Q96L08 255 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 CWH43Q9H720 699 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 HPS4Q9NQG7 708 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 PRKAG2Q9UGJ0 569 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 ZNF639Q9UID6 485 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 SLCO3A1Q9UIG8 710 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 TLK1Q9UKI8 766 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 DMDP11532 3685 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 A0A0A0MRY4 1105 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 TIMM44O43615 452 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 NPHS1O60500 1241 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 NDUFS2O75306 463 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 UPK1BO75841 260 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 CCNKO75909 580 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 GABARAPO95166 117 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 RPLP2P05387 115 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 HSD17B1P14061 328 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 CPB1P15086 417 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 SPNP16150 400 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 NPR3P17342 541 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 ITIH1P19827 911 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 PRKACBP22694 351 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 GRIK1P39086 918 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 EIF2DP41214 584 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 TKTL1P51854 596 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 GP2P55259 537 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 P2RX3P56373 397 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 PIGFQ07326 219 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 DUSP4Q13115 394 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 PPP1R3AQ16821 1122 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 CYP51A1Q16850 503 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 GEN1Q17RS7 908 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 DPY19L1Q2PZI1 675 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 CATSPEREQ5SY80 951 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 CNKSR3Q6P9H4 555 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 THAP5Q7Z6K1 395 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 FAM20CQ8IXL6 584 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 SLC38A6Q8IZM9 456 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 OR9I1Q8NGQ6 314 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 RHOXF1Q8NHV9 184 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 GIPC2Q8TF65 315 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 PHF10Q8WUB8 498 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 TNIP3Q96KP6 325 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 SPATA13Q96N96 652 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 SEPT5Q99719 369 aaPredicted RBP10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 ZNF670Q9BS34 389 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 SNRNP25Q9BV90 132 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 ULBP1Q9BZM6 244 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 IL1RL2Q9HB29 575 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 EIF2B3Q9NR50 452 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 ABCD2Q9UBJ2 740 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 SLC39A10Q9ULF5 831 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 LAMA1P25391 3075 aa10.04□□□□□ -0.8
HMGCLL1-205ENST00000398661 ALPK3Q96L96 1907 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 M0QZQ0 153 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 CCRL2O00421 344 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 ARPC2O15144 300 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 RAD51BO15315 384 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 TEX28O15482 410 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 DNAJB5O75953 348 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 INMTO95050 263 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 TBX18O95935 607 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 LDLRP01130 860 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 FYNP06241 537 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 IFNA8P32881 189 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 IMPG1Q17R60 797 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 EML3Q32P44 896 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 ADPRMQ3LIE5 342 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 CEP78Q5JTW2 689 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 CNSTQ6PJW8 725 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 PRR23BQ6ZRT6 265 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 UTS2BQ765I0 119 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 RETREG3Q86VR2 466 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 RALGPS2Q86X27 583 aaPredicted RBP10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 LGI2Q8N0V4 545 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 FSTL5Q8N475 847 aaPredicted RBP10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 POC5Q8NA72 575 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 KCTD4Q8WVF5 259 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 HTR3CQ8WXA8 447 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 ATL1Q8WXF7 558 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 HOPXQ9BPY8 73 aaPredicted RBP10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 BCL7BQ9BQE9 202 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 ALOXE3Q9BYJ1 711 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 CEP41Q9BYV8 373 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 LRRC4Q9HBW1 653 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 MAGED2Q9UNF1 606 aaPredicted RBP10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 SNX10Q9Y5X0 201 aa10.03□□□□□ -0.8
HMGCLL1-205ENST00000398661 SNX5Q9Y5X3 404 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms