RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 THOP1P52888 689 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 TAS2R39P59534 338 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 CDK3Q00526 305 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 CSTF1Q05048 431 aaKnown RBP14.03□□□□□ -0.16
SKA1-202ENST00000398452 RBM20Q5T481 1227 aaKnown RBP14.03□□□□□ -0.16
SKA1-202ENST00000398452 DOK6Q6PKX4 331 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 MACC1Q6ZN28 852 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 CMC1Q7Z7K0 106 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 EXOC3L1Q86VI1 746 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 LCA5Q86VQ0 697 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 TRAPPC5Q8IUR0 188 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 KRT222Q8N1A0 295 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 CADM4Q8NFZ8 388 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 FAM174AQ8TBP5 190 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 BOCQ9BWV1 1114 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 SLC13A1Q9BZW2 595 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 P2RY12Q9H244 342 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 CAB39LQ9H9S4 337 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 SSU72Q9NP77 194 aaKnown RBP14.03□□□□□ -0.16
SKA1-202ENST00000398452 FZD3Q9NPG1 666 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 MBNL1Q9NR56 388 aaKnown RBP14.03□□□□□ -0.16
SKA1-202ENST00000398452 DLGAP2Q9P1A6 1054 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 DCDC2Q9UHG0 476 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 MOSPD1Q9UJG1 213 aa14.03□□□□□ -0.16
SKA1-202ENST00000398452 GVINP1Q7Z2Y8 2422 aa14.02□□□□□ -0.16
SKA1-202ENST00000398452 IGLV3-16A0A075B6K0 115 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 A6NNZ2 444 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 GPR89AB7ZAQ6 455 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 K7ESF4 209 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 K7ESM1 405 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 PHGDHO43175 533 aaKnown RBP14.02□□□□□ -0.17
SKA1-202ENST00000398452 LATO43561 262 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 NIPSNAP2O75323 286 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 MTX2O75431 263 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 ALDOAP04075 364 aaKnown RBP14.02□□□□□ -0.17
SKA1-202ENST00000398452 C2P06681 752 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 GPR89BP0CG08 455 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 COL6A2P12110 1019 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 NR1D1P20393 614 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 FDXRP22570 491 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 PPP2R2AP63151 447 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 FGL2Q14314 439 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 FAM83EQ2M2I3 478 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 TSNAXIP1Q2TAA8 658 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 SYTL3Q4VX76 610 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 TNFAIP8L3Q5GJ75 292 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 CTSL3PQ5NE16 218 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 AGAP9Q5VTM2 703 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 TMEM220Q6QAJ8 160 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 MICALCLQ6ZW33 695 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 OTOAQ7RTW8 1153 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 LONP2Q86WA8 852 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 NKAPQ8N5F7 415 aaKnown RBP14.02□□□□□ -0.17
SKA1-202ENST00000398452 CLDN19Q8N6F1 224 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 PNPLA1Q8N8W4 532 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 CCDC63Q8NA47 563 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 PLA2G15Q8NCC3 412 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 MZB1Q8WU39 189 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 INPP5DQ92835 1189 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 ZDHHC16Q969W1 377 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 SKA1Q96BD8 255 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 CENPTQ96BT3 561 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 BIRC7Q96CA5 298 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 KCTD12Q96CX2 325 aaKnown RBP14.02□□□□□ -0.17
SKA1-202ENST00000398452 APOPT1Q96IL0 206 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 SERAC1Q96JX3 654 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 SCYL1Q96KG9 808 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 MCMBPQ9BTE3 642 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 APOOQ9BUR5 198 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 OR2AG1Q9H205 316 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 CNOT10Q9H9A5 744 aaKnown RBP14.02□□□□□ -0.17
SKA1-202ENST00000398452 AASDHPPTQ9NRN7 309 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 SPATS2LQ9NUQ6 558 aaKnown RBP14.02□□□□□ -0.17
SKA1-202ENST00000398452 GRID1Q9ULK0 1009 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 INVSQ9Y283 1065 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 HS3ST3A1Q9Y663 406 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 TRPM6Q9BX84 2022 aa14.02□□□□□ -0.17
SKA1-202ENST00000398452 CFAP54Q96N23 3096 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 PABPN1LA6NDY0 278 aaKnown RBP14.01□□□□□ -0.17
SKA1-202ENST00000398452 OR2AG2A6NM03 316 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 H3BQF6 201 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 DNAJC6O75061 913 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 SPAG7O75391 227 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 RFPL1O75677 317 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 APOA4P06727 396 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 GSTA1P08263 222 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 GSTM1P09488 218 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 VCLP18206 1134 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 ITGB6P18564 788 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 CD9P21926 228 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 DGKAP23743 735 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 IGFALSP35858 605 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 RABIFP47224 123 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 FNTBP49356 437 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 YPEL5P62699 121 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 GSTM4Q03013 218 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 PTK2BQ14289 1009 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 INSCQ1MX18 579 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 WDR45BQ5MNZ6 344 aa14.01□□□□□ -0.17
SKA1-202ENST00000398452 LRRC8EQ6NSJ5 796 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms