RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 ATG14Q6ZNE5 492 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 DEFB128Q7Z7B8 93 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 OR7D4Q8NG98 312 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 CSGALNACT1Q8TDX6 532 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 SPRTNQ9H040 489 aaPredicted RBP16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 FNIP2Q9P278 1114 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 CYTH4Q9UIA0 394 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 LAMA4Q16363 1823 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 PLK4O00444 970 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 TMCC2O75069 709 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 TRBC1P01850 177 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 PRPS2P11908 318 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 CBX3Q13185 183 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 ESAMQ96AP7 390 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 DNAJC11Q9NVH1 559 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 PCDHGC4Q9Y5F7 938 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 ACSL4O60488 711 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 DHRS4L1P0CG22 281 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 CXCR2P25025 360 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 CTSKP43235 329 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 CCR3P51677 355 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 UGT2B15P54855 530 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 FAM174BQ3ZCQ3 159 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 OOSP2Q86WS3 158 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 GRIN3AQ8TCU5 1115 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 TUBA8Q9NY65 449 aaPredicted RBP16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.22■□□□□ 0.198e-6■■■■□ 25
CTDSP2-201ENST00000398073 NUP98P52948 1817 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 SNNO75324 88 aaPredicted RBP16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 GUCY1B2O75343 617 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 CXCR3P49682 368 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 KLHL23Q8NBE8 558 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 GMLQ99445 158 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 SPATA5L1Q9BVQ7 753 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 MTIF3Q9H2K0 278 aaKnown RBP16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 CAPN10Q9HC96 672 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 FKBPLQ9UIM3 349 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 OGDHLQ9ULD0 1010 aa16.22■□□□□ 0.19
CTDSP2-201ENST00000398073 CCDC182A6NF36 153 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 GSK3BP49841 420 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 CDH4P55283 916 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 ECT2LQ008S8 904 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 RFTN1Q14699 578 aaPredicted RBP16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 MARVELD2Q8N4S9 558 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 SCAMP5Q8TAC9 235 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 TRMT13Q9NUP7 481 aaKnown RBP16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 ADAMTS6Q9UKP5 1117 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 SSR3Q9UNL2 185 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 PRR23AA6NEV1 266 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 EDIL3O43854 480 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 OR10H3O60404 316 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 STX11O75558 287 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 POLR2EP19388 210 aaKnown RBP16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 ETV4P43268 484 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 ASMTP46597 345 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 IKBKEQ14164 716 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 TAF1AQ15573 450 aaPredicted RBP16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 RBM20Q5T481 1227 aaKnown RBP16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 SULT1C3Q6IMI6 304 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 CGB2Q6NT52 195 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 PAQR3Q6TCH7 311 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 PTCHD4Q6ZW05 846 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 OR9I1Q8NGQ6 314 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 DNAJB8Q8NHS0 232 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 ENTPD4Q9Y227 616 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 DNAJB13P59910 316 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 CCNIQ14094 377 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 BTG3Q14201 252 aaPredicted RBP16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 USP41Q3LFD5 358 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 MZT2AQ6P582 158 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 AHSA2Q719I0 299 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 RASAL3Q86YV0 1011 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 TRIM48Q8IWZ4 208 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 GPATCH1Q9BRR8 931 aaKnown RBP16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 MRPL17Q9NRX2 175 aaKnown RBP16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 SLC2A6Q9UGQ3 507 aa16.21■□□□□ 0.19
CTDSP2-201ENST00000398073 OR51F1A6NGY5 319 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 KERAO60938 352 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 PRAMEF1O95521 474 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 NR2F6P10588 404 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 NTSP30990 170 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 ABRQ12979 859 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 TIGD5Q53EQ6 642 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 RBM48Q5RL73 367 aaKnown RBP16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 STEAP4Q687X5 459 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 SDE2Q6IQ49 451 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 SIDT2Q8NBJ9 832 aaKnown RBP16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 OR6K2Q8NGY2 324 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 OR5K1Q8NHB7 308 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 HTRA1Q92743 480 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 PCYT2Q99447 389 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 HIPK3Q9H422 1215 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 MIOSQ9NXC5 875 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 ZIM2Q9NZV7 527 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 ATP6V1HQ9UI12 483 aa16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 WBP11Q9Y2W2 641 aaKnown RBP16.21■□□□□ 0.18
CTDSP2-201ENST00000398073 A0A1B0GVM2 712 aa16.2■□□□□ 0.18
CTDSP2-201ENST00000398073 TCAF2A6NFQ2 919 aa16.2■□□□□ 0.18
CTDSP2-201ENST00000398073 A6NHS1 94 aa16.2■□□□□ 0.18
CTDSP2-201ENST00000398073 LOC110117498-PIK3R3F6TDL0 507 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms