RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 RAET1GQ6H3X3 334 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 KLC3Q6P597 504 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 TRIM67Q6ZTA4 783 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 ISCA2Q86U28 154 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 TRIM69Q86WT6 500 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 SPATA6LQ8N4H0 392 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 TP53I13Q8NBR0 393 aaPredicted RBP19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 RAB3IL1Q8TBN0 382 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 HMGB4Q8WW32 186 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 FAM136AQ96C01 138 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 CHRDQ9H2X0 955 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 TBC1D17Q9HA65 648 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 SPATS2LQ9NUQ6 558 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 C2orf42Q9NWW7 574 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 CEP192Q8TEP8 1941 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 ZFC3H1O60293 1989 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 GMNCA6NCL1 334 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 TK2O00142 265 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 MAGEC1O60732 1142 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 CPA3P15088 417 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 MSH3P20585 1137 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 TRIM23P36406 574 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 GLRBP48167 497 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 IL2P60568 153 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 ATP6V0D1P61421 351 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 TMEM115Q12893 351 aaPredicted RBP19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 GBX1Q14549 363 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 ZYG11AQ6WRX3 759 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 RASGEF1AQ8N9B8 481 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 PLA2G15Q8NCC3 412 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 OR6Y1Q8NGX8 325 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 RHEBL1Q8TAI7 183 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 NAT14Q8WUY8 206 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 ZNF75CPQ92670 426 aaPredicted RBP19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 CHMP6Q96FZ7 201 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 SLC17A9Q9BYT1 436 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 TFB2MQ9H5Q4 396 aaKnown RBP19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 SGK2Q9HBY8 427 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 CD93Q9NPY3 652 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 XPR1Q9UBH6 696 aa19.22■□□□□ 0.67
PDLIM2-205ENST00000397761 F8W8V4 182 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 EIF3FO00303 357 aaPredicted RBP19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 ZBTB14O43829 449 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 MTX2O75431 263 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 ALDH3A1P30838 453 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 RPS9P46781 194 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 SEC24CP53992 1094 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 IRX4P78413 519 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 NUDCD3Q8IVD9 361 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 TRIM42Q8IWZ5 723 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 ZBTB2Q8N680 514 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 FLCNQ8NFG4 579 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 PJA1Q8NG27 643 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 OR2T34Q8NGX1 318 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 PTERQ96BW5 349 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 HIC2Q96JB3 615 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 MECRQ9BV79 373 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 TEX101Q9BY14 249 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 ZCCHC2Q9C0B9 1178 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 TRIM39Q9HCM9 518 aa19.21■□□□□ 0.67
PDLIM2-205ENST00000397761 TBC1D3DA0A087WVF3 549 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 TBC1D3IA0A087WXS9 549 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 TBC1D3EA0A087X179 549 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 TBC1D3KA0A087X1G2 549 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 WDR91A4D1P6 747 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 TBC1D3FA6NER0 549 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 TCP11X1B4DZS4 312 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 TBC1D3LB9A6J9 549 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 INPP4BO15327 924 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 TRIM16O95361 564 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 TBC1D3HP0C7X1 549 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 TFEBP19484 476 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 AOAHP28039 575 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 ACSL1P33121 698 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 PRLHRP49683 370 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 PPP2CBP62714 309 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 PPP2CAP67775 309 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 SGCGQ13326 291 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 IRF4Q15306 451 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 BCL7AQ4VC05 210 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 TBC1D3GQ6DHY5 549 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 TBC1D3CQ6IPX1 549 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 ADGRG6Q86SQ4 1221 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 CPNE9Q8IYJ1 553 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 TBC1D3Q8IZP1 549 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 GJD3Q8N144 294 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 SPEM1Q8N4L4 309 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 CCDC63Q8NA47 563 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 LRRC8CQ8TDW0 803 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 EEF1AKMT1Q8WVE0 214 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 KIAA1191Q96A73 305 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 SGF29Q96ES7 293 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 SCYL1Q96KG9 808 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 C1QTNF7Q9BXJ2 289 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 MANSC1Q9H8J5 431 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 CD320Q9NPF0 282 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 OXSMQ9NWU1 459 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 CPSF2Q9P2I0 782 aaKnown RBP19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 MUTYHQ9UIF7 546 aa19.2■□□□□ 0.66
PDLIM2-205ENST00000397761 LRRC72A6NJI9 287 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms