RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 AIFM2Q9BRQ8 373 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 B3GNT4Q9C0J1 378 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 CLPBQ9H078 707 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ATP13A3Q9H7F0 1226 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 FANCEQ9HB96 536 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 ZBTB26Q9HCK0 441 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 CD320Q9NPF0 282 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 HCSTQ9UBK5 93 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 MTRRQ9UBK8 725 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 UXTQ9UBK9 157 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 ENPP5Q9UJA9 477 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 CAB39Q9Y376 341 aaPredicted RBP4.99□□□□□ -1.61
SSR1-202ENST00000397511 TCAF1Q9Y4C2 921 aa4.99□□□□□ -1.61
SSR1-202ENST00000397511 PDCD11Q14690 1871 aaKnown RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 A0A1B0GTL3 188 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 MAGEB16A2A368 324 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 TCAF2A6NFQ2 919 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 A8MT66 165 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 UBFD1O14562 309 aaKnown RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 TADA2AO75478 443 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 TIPRLO75663 272 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 CABYRO75952 493 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SEC14L2O76054 403 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 CLIC3O95833 236 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 GNAO1P09471 354 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 ODC1P11926 461 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 CTRB1P17538 263 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 POLR2CP19387 275 aaPredicted RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 EEF1B2P24534 225 aaKnown RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 PCSK1P29120 753 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 LRPAP1P30533 357 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SCNN1AP37088 669 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 MAGEA12P43365 314 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 OR1G1P47890 313 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SERPINB10P48595 397 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 HLCSP50747 726 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 CDKN2DP55273 166 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 HUNKP57058 714 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 MRPS6P82932 125 aaKnown RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 IFITM3Q01628 133 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 VAC14Q08AM6 782 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 MAP2K5Q13163 448 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 FASTKQ14296 549 aaKnown RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 RFTN1Q14699 578 aaPredicted RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 CARTPTQ16568 116 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 PFKFB4Q16877 469 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 FAM110CQ1W6H9 321 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 FUT11Q495W5 492 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 RAB41Q5JT25 222 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 RAP1GAP2Q684P5 730 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 CTRB2Q6GPI1 263 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 TMEM207Q6UWW9 146 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 CHSY3Q70JA7 882 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 LINC00523Q86TU6 105 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 CUZD1Q86UP6 607 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 METTL23Q86XA0 190 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 AFAP1L2Q8N4X5 818 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SIMC1Q8NDZ2 872 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 BPIFB6Q8NFQ5 453 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 OR13C4Q8NGS5 318 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SEPT8Q92599 483 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 CNDP1Q96KN2 507 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 C3orf30Q96M34 536 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 GPR78Q96P69 363 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SNX18Q96RF0 628 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SLC9A7Q96T83 725 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 UHRF1Q96T88 793 aaPredicted RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 KIFC1Q9BW19 673 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 EMILIN2Q9BXX0 1053 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 ARHGAP39Q9C0H5 1083 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SEMA4BQ9NPR2 832 aaPredicted RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 TRMT13Q9NUP7 481 aaKnown RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 ADAM28Q9UKQ2 775 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 CDH9Q9ULB4 789 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 EIF3LQ9Y262 564 aaKnown RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 DGKBQ9Y6T7 804 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 PRORSD1PA6NEY8 169 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 FADS2P1A8MWK0 482 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 NR5A2O00482 541 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SOCS2O14508 198 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 SDHDO14521 159 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 UBDO15205 165 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 MATN3O15232 486 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 IRAK2O43187 625 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 CCNKO75909 580 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 ANXA9O76027 345 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 MFN2O95140 757 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 MBL2P11226 248 aaPredicted RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 BMP2P12643 396 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 JUNBP17275 347 aaPredicted RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 PKLRP30613 574 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 CASP3P42574 277 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 ZNF135P52742 658 aaPredicted RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 PSME3P61289 254 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 CDC42EP1Q00587 391 aa4.98□□□□□ -1.61
SSR1-202ENST00000397511 YWHAHQ04917 246 aaPredicted RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 GALNT1Q10472 559 aaPredicted RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 ILF2Q12905 390 aaKnown RBP4.98□□□□□ -1.61
SSR1-202ENST00000397511 NAB1Q13506 487 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms