RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 CFAP206Q8IYR0 622 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 GRHL3Q8TE85 626 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.24□□□□□ -0.452e-7■□□□□ 9
SMU1-201ENST00000397149 HBS1LQ9Y450 684 aaKnown RBP12.24□□□□□ -0.45
SMU1-201ENST00000397149 PTPRKQ15262 1439 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 ZNF135P52742 658 aaPredicted RBP12.24□□□□□ -0.45
SMU1-201ENST00000397149 FOXR2Q6PJQ5 311 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 SLC16A9Q7RTY1 509 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 PHTF2Q8N3S3 785 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 DCBLD1Q8N8Z6 715 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 ZNF398Q8TD17 642 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 VAT1Q99536 393 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 SLC39A8Q9C0K1 460 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 IFT80Q9P2H3 777 aaPredicted RBP12.24□□□□□ -0.45
SMU1-201ENST00000397149 POU2F3Q9UKI9 436 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 ACVR2AP27037 513 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 MAGEA3P43357 314 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 PEX6Q13608 980 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 SLC30A10Q6XR72 485 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 HOMEZQ8IX15 550 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 ABRAQ8N0Z2 381 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 FIBCD1Q8N539 461 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 RDH11Q8TC12 318 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 SENP8Q96LD8 212 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 DPYSL5Q9BPU6 564 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 CLK4Q9HAZ1 481 aaKnown RBP12.24□□□□□ -0.45
SMU1-201ENST00000397149 NRCAMQ92823 1304 aa12.24□□□□□ -0.45
SMU1-201ENST00000397149 TEX13DA0A0J9YY54 714 aaPredicted RBP12.23□□□□□ -0.45
SMU1-201ENST00000397149 ENPP3O14638 875 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 LSM8O95777 96 aaKnown RBP12.23□□□□□ -0.45
SMU1-201ENST00000397149 IFNA2P01563 188 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 VARSP26640 1264 aaKnown RBP12.23□□□□□ -0.45
SMU1-201ENST00000397149 CASRP41180 1078 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 SLC6A3Q01959 620 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 CD47Q08722 323 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 ELOAQ14241 798 aaKnown RBP12.23□□□□□ -0.45
SMU1-201ENST00000397149 USP30Q70CQ3 517 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 MCOLN2Q8IZK6 566 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 IL22Q9GZX6 179 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 TUBG2Q9NRH3 451 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 AP4B1Q9Y6B7 739 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 RAB27AP51159 221 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 ITGA7Q13683 1181 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 TIGD2Q4W5G0 525 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 NKAPLQ5M9Q1 402 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 PHF19Q5T6S3 580 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 AADACL2Q6P093 401 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 FAM35AQ86V20 835 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 LPPQ93052 612 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 PCDHB11Q9Y5F2 797 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 PEG3Q9GZU2 1588 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 CPED1A4D0V7 1026 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 TOR1BO14657 336 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 BCKDKO14874 412 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 CD2P06729 351 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 RCAN1P53805 252 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 ALYREFQ86V81 257 aaKnown RBP12.23□□□□□ -0.45
SMU1-201ENST00000397149 HELQQ8TDG4 1101 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 AUTS2Q8WXX7 1259 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 NINJ1Q92982 152 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 C12orf66Q96MD2 445 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 IL12RB2Q99665 862 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 GPATCH1Q9BRR8 931 aaKnown RBP12.23□□□□□ -0.45
SMU1-201ENST00000397149 MEAF6Q9HAF1 191 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 RC3H2Q9HBD1 1191 aaKnown RBP12.23□□□□□ -0.45
SMU1-201ENST00000397149 GMEB2Q9UKD1 530 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 TESMINQ9Y4I5 508 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 ZNF518AQ6AHZ1 1483 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 CABYRO75952 493 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 GSTT2BP0CG30 244 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 FNTBP49356 437 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 APLP1P51693 650 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 MCL1Q07820 350 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 SSX2Q16385 188 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 PLEKHG4Q58EX7 1191 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 KYAT3Q6YP21 454 aaKnown RBP12.23□□□□□ -0.45
SMU1-201ENST00000397149 SV2AQ7L0J3 742 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 TMEM17Q86X19 198 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 TMEM199Q8N511 208 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 AADATQ8N5Z0 425 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 FAM47BQ8NA70 645 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 STOML3Q8TAV4 291 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 LIN37Q96GY3 246 aaPredicted RBP12.23□□□□□ -0.45
SMU1-201ENST00000397149 PIWIL1Q96J94 861 aaKnown RBP12.23□□□□□ -0.45
SMU1-201ENST00000397149 MAPKBP1O60336 1514 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 TRIM64CA6NLI5 447 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 A8MUI8 341 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 TTKP33981 857 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 GPD2P43304 727 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 CCR10P46092 362 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 AVPR1BP47901 424 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 ATXN7L3Q14CW9 347 aaPredicted RBP12.23□□□□□ -0.45
SMU1-201ENST00000397149 PRAMEF19Q5SWL8 479 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 GRHL2Q6ISB3 625 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 GK5Q6ZS86 529 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 UNC5BQ8IZJ1 945 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 TOR1AIP2Q8NFQ8 470 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 SYN2Q92777 582 aaPredicted RBP12.23□□□□□ -0.45
SMU1-201ENST00000397149 HDAC10Q969S8 669 aa12.23□□□□□ -0.45
SMU1-201ENST00000397149 RENP00797 406 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms