RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 MAGEC1O60732 1142 aa10.44□□□□□ -0.74
NUP98-205ENST00000397007 DGKAP23743 735 aa10.44□□□□□ -0.74
NUP98-205ENST00000397007 GPR1P46091 355 aa10.44□□□□□ -0.74
NUP98-205ENST00000397007 ERCC6LQ2NKX8 1250 aa10.44□□□□□ -0.74
NUP98-205ENST00000397007 RAET1GQ6H3X3 334 aa10.44□□□□□ -0.74
NUP98-205ENST00000397007 ARMCX6Q7L4S7 300 aa10.44□□□□□ -0.74
NUP98-205ENST00000397007 SPATA16Q9BXB7 569 aa10.44□□□□□ -0.74
NUP98-205ENST00000397007 ASB8Q9H765 288 aa10.44□□□□□ -0.74
NUP98-205ENST00000397007 POPDC3Q9HBV1 291 aa10.44□□□□□ -0.74
NUP98-205ENST00000397007 PHPT1Q9NRX4 125 aaPredicted RBP10.44□□□□□ -0.74
NUP98-205ENST00000397007 TM7SF3Q9NS93 570 aa10.44□□□□□ -0.74
NUP98-205ENST00000397007 NLGN3Q9NZ94 848 aa10.44□□□□□ -0.74
NUP98-205ENST00000397007 VAPBO95292 243 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 MATN4O95460 622 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 XPAP23025 273 aaPredicted RBP10.43□□□□□ -0.74
NUP98-205ENST00000397007 TTPAP49638 278 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 CTBSQ01459 385 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 RNF187Q5TA31 235 aaPredicted RBP10.43□□□□□ -0.74
NUP98-205ENST00000397007 CCDC70Q6NSX1 233 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 TRIM74Q86UV6 250 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 ZBED8Q8IZ13 594 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 TMEM151AQ8N4L1 468 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 PDLIM5Q96HC4 596 aaKnown RBP10.43□□□□□ -0.74
NUP98-205ENST00000397007 GPR22Q99680 433 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 SLC30A3Q99726 388 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 SEMA5BQ9P283 1151 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 EIF3FO00303 357 aaPredicted RBP10.43□□□□□ -0.74
NUP98-205ENST00000397007 TRIM61Q5EBN2 209 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 NEPROQ6NW34 567 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 NEK10Q6ZWH5 1172 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 CLEC14AQ86T13 490 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 SLC22A15Q8IZD6 547 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 RGL4Q8IZJ4 473 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 OR4C6Q8NH72 309 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 SLC44A1Q8WWI5 657 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 ZNF669Q96BR6 464 aaPredicted RBP10.43□□□□□ -0.74
NUP98-205ENST00000397007 ZNF514Q96K75 400 aaPredicted RBP10.43□□□□□ -0.74
NUP98-205ENST00000397007 FAM167BQ9BTA0 163 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 AARSD1Q9BTE6 412 aaKnown RBP10.43□□□□□ -0.74
NUP98-205ENST00000397007 SMOC1Q9H4F8 434 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 FAM96AQ9H5X1 160 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 PLEKHM1Q9Y4G2 1056 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 GNSP15586 552 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 PNLIPP16233 465 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 CCR7P32248 378 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 MGAT5Q09328 741 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 CALCOCO2Q13137 446 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 SF3A2Q15428 464 aaKnown RBP10.43□□□□□ -0.74
NUP98-205ENST00000397007 TIFABQ6ZNK6 161 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 CEP68Q76N32 757 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 CACTIN-AS1Q8N1I8 211 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 MYRIPQ8NFW9 859 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 FLVCR1-AS1Q8TAF5 88 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 CD200R1Q8TD46 325 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 GANCQ8TET4 914 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 KCNJ9Q92806 393 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 TTC25Q96NG3 672 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 RBBP8Q99708 897 aa10.43□□□□□ -0.74
NUP98-205ENST00000397007 SCHIP1Q9P0W5 487 aaPredicted RBP10.43□□□□□ -0.74
NUP98-205ENST00000397007 HAUS5O94927 633 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 ERVK-10P10266 1014 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 HOXD11P31277 338 aaPredicted RBP10.42□□□□□ -0.74
NUP98-205ENST00000397007 FASLGP48023 281 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 MPP1Q00013 466 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 RPA4Q13156 261 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 EFTUD2Q15029 972 aaKnown RBP eCLIP10.42□□□□□ -0.743e-6■■■■■ 41.9
NUP98-205ENST00000397007 ANKMY2Q8IV38 441 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 GSPT2Q8IYD1 628 aaKnown RBP10.42□□□□□ -0.74
NUP98-205ENST00000397007 RBFAQ8N0V3 343 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 FBXO15Q8NCQ5 510 aaPredicted RBP10.42□□□□□ -0.74
NUP98-205ENST00000397007 CCL4L1Q8NHW4 92 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 UBXN10Q96LJ8 280 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 SAYSD1Q9NPB0 183 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 TMEM98Q9Y2Y6 226 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 SNRNP200O75643 2136 aaKnown RBP10.42□□□□□ -0.74
NUP98-205ENST00000397007 CACNA1HO95180 2353 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 ESR1P03372 595 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 RHOXF2BP0C7M4 288 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 ITGALP20701 1170 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 CD151P48509 253 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 CSE1LP55060 971 aaKnown RBP10.42□□□□□ -0.74
NUP98-205ENST00000397007 CDKN2DP55273 166 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 SLMAPQ14BN4 828 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 BEND6Q5SZJ8 279 aaPredicted RBP10.42□□□□□ -0.74
NUP98-205ENST00000397007 ALS2CLQ60I27 953 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 EMBQ6PCB8 327 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 ADGRD1Q6QNK2 874 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 CEP128Q6ZU80 1094 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 LRRC56Q8IYG6 542 aaPredicted RBP10.42□□□□□ -0.74
NUP98-205ENST00000397007 IQCKQ8N0W5 287 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 NAGSQ8N159 534 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 PIGKQ92643 395 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 OLFM1Q99784 485 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 RHOXF2Q9BQY4 288 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 TMEM168Q9H0V1 697 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 WDR37Q9Y2I8 494 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 PCDHB1Q9Y5F3 818 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 CER1O95813 267 aa10.42□□□□□ -0.74
NUP98-205ENST00000397007 ZNF7P17097 686 aaPredicted RBP10.42□□□□□ -0.74
NUP98-205ENST00000397007 XRCC1P18887 633 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms