RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 ARL4DP49703 201 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 PPIDQ08752 370 aaKnown RBP17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 TUBB3Q13509 450 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 GTF2H3Q13889 308 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 CRTC3Q6UUV7 619 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 NT5DC3Q86UY8 548 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 SSC4DQ8WTU2 575 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 ZFPM2Q8WW38 1151 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 RSC1A1Q92681 617 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 EID2BQ96D98 161 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 ELMO2Q96JJ3 720 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 TRIB3Q96RU7 358 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 ZCCHC2Q9C0B9 1178 aaKnown RBP17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 DTLQ9NZJ0 730 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 DNAJC16Q9Y2G8 782 aa17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 DNMT3AQ9Y6K1 912 aaPredicted RBP17.18■□□□□ 0.34
EXOSC3-202ENST00000396521 A0A1W2PQJ5 194 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 KIF1CO43896 1103 aaKnown RBP17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 DDAH2O95865 285 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 SERPING1P05155 500 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 LPOP22079 712 aaPredicted RBP17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 FECHP22830 423 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 RPL10P27635 214 aaKnown RBP17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 GBE1Q04446 702 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 CDK18Q07002 472 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 DMPKQ09013 629 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 ALS2CLQ60I27 953 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 HGSNATQ68CP4 663 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 PWWP2BQ6NUJ5 590 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 FAM92BQ6ZTR7 304 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 VSIG1Q86XK7 387 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 ZNF547Q8IVP9 402 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 IMP4Q96G21 291 aaKnown RBP17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 ZNF514Q96K75 400 aaPredicted RBP17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 BTBD6Q96KE9 485 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 SLC25A51Q9H1U9 297 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 ACSS2Q9NR19 701 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 FGF21Q9NSA1 209 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 UVRAGQ9P2Y5 699 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 ZNF451Q9Y4E5 1061 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 ICE1Q9Y2F5 2266 aa17.17■□□□□ 0.34
EXOSC3-202ENST00000396521 CREBBPQ92793 2442 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 KLHL33A6NCF5 533 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 OR52A4PA6NMU1 304 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 KCNK1O00180 336 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 PROSCO94903 275 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 HSD11B2P80365 405 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 TYRO3Q06418 890 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 TMEM115Q12893 351 aaPredicted RBP17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 GALNT3Q14435 633 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 SEPT7Q16181 437 aaKnown RBP17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 ALKBH5Q6P6C2 394 aaKnown RBP17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 AMZ2Q86W34 360 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 TRAPPC5Q8IUR0 188 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 PQLC3Q8N755 202 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 BEND7Q8N7W2 519 aaPredicted RBP17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 CNTD1Q8N815 330 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 SLC29A3Q9BZD2 475 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 TRABDQ9H4I3 376 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 CBX8Q9HC52 389 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 ARFGAP3Q9NP61 516 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 SHOC2Q9UQ13 582 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 FARSAQ9Y285 508 aaKnown RBP17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 ZNF711Q9Y462 761 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 MAP4K5Q9Y4K4 846 aa17.16■□□□□ 0.34
EXOSC3-202ENST00000396521 UTP20O75691 2785 aaKnown RBP17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 TLCD2A6NGC4 264 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 DPM1O60762 260 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 CPNE3O75131 537 aaKnown RBP17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 NDST3O95803 873 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 MBD3O95983 291 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 KLK3P07288 261 aaPredicted RBP17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 BPIP17213 487 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 GNLYP22749 145 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 HMGCLP35914 325 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 GSDMDP57764 484 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 TUBB4BP68371 445 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 SLC10A2Q12908 348 aaPredicted RBP17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 TUBB2AQ13885 445 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 NR1I3Q14994 352 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 PDK1Q15118 436 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 CHRNA6Q15825 494 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 PLA2G4EQ3MJ16 856 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 ATP13A4Q4VNC1 1196 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 TMTC4Q5T4D3 741 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 ZNF648Q5T619 568 aaPredicted RBP17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 IZUMO3Q5VZ72 239 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 C11orf96Q7Z7L8 435 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 TMEM135Q86UB9 458 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 D2HGDHQ8N465 521 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 TADA1Q96BN2 335 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 LRFN5Q96NI6 719 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 RNF157Q96PX1 679 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 TUBB2BQ9BVA1 445 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 ING2Q9H160 280 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 LATS2Q9NRM7 1088 aa17.15■□□□□ 0.34
EXOSC3-202ENST00000396521 IGHV5-51A0A0C4DH38 117 aa17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 SSU72P8A0A1W2PR75 194 aa17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 PPP1R12AO14974 1030 aaPredicted RBP17.14■□□□□ 0.33
EXOSC3-202ENST00000396521 PDGFAP04085 211 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms