RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 GIMAP7Q8NHV1 300 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 INPP5DQ92835 1189 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 SGF29Q96ES7 293 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 HIC2Q96JB3 615 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 LENG8Q96PV6 779 aaPredicted RBP20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 TSSK1BQ9BXA7 367 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 ZCCHC2Q9C0B9 1178 aaKnown RBP20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 CHRDQ9H2X0 955 aa20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 SPATS2LQ9NUQ6 558 aaKnown RBP20.16■□□□□ 0.82
VCPKMT-202ENST00000395860 QSOX1O00391 747 aa20.15■□□□□ 0.82
VCPKMT-202ENST00000395860 IL2P60568 153 aa20.15■□□□□ 0.82
VCPKMT-202ENST00000395860 ACAP2Q15057 778 aa20.15■□□□□ 0.82
VCPKMT-202ENST00000395860 PDK4Q16654 411 aa20.15■□□□□ 0.82
VCPKMT-202ENST00000395860 ADAMTSL4Q6UY14 1074 aa20.15■□□□□ 0.82
VCPKMT-202ENST00000395860 TRIM74Q86UV6 250 aa20.15■□□□□ 0.82
VCPKMT-202ENST00000395860 CPNE9Q8IYJ1 553 aa20.15■□□□□ 0.82
VCPKMT-202ENST00000395860 CLDN23Q96B33 292 aa20.15■□□□□ 0.82
VCPKMT-202ENST00000395860 CCDC134Q9H6E4 229 aa20.15■□□□□ 0.82
VCPKMT-202ENST00000395860 MBNL1Q9NR56 388 aaKnown RBP20.15■□□□□ 0.82
VCPKMT-202ENST00000395860 CPSF2Q9P2I0 782 aaKnown RBP20.15■□□□□ 0.82
VCPKMT-202ENST00000395860 XPR1Q9UBH6 696 aa20.15■□□□□ 0.82
VCPKMT-202ENST00000395860 MID2Q9UJV3 735 aa20.15■□□□□ 0.82
VCPKMT-202ENST00000395860 SIT1Q9Y3P8 196 aa20.15■□□□□ 0.82
VCPKMT-202ENST00000395860 OR2AG2A6NM03 316 aa20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 TK2O00142 265 aa20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 MAGEC1O60732 1142 aa20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 CD1DP15813 335 aa20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 ZXDAP98168 799 aa20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 OTOAQ7RTW8 1153 aa20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 HEATR4Q86WZ0 1026 aa20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 SPEM1Q8N4L4 309 aa20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 ZBTB2Q8N680 514 aa20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 RASGEF1AQ8N9B8 481 aa20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 MECRQ9BV79 373 aa20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 DERL2Q9GZP9 239 aa20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 TRIM39Q9HCM9 518 aa20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 MBD1Q9UIS9 605 aaPredicted RBP20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 CYP8B1Q9UNU6 501 aa20.14■□□□□ 0.81
VCPKMT-202ENST00000395860 BIRC5O15392 142 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 IGLV3-19P01714 112 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 BPGMP07738 259 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 RBP1P09455 135 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 RPS9P46781 194 aaKnown RBP20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 GTF2H3Q13889 308 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 TRIM69Q86WT6 500 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 NUDCD3Q8IVD9 361 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 LRRC8CQ8TDW0 803 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 LINGO1Q96FE5 620 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 MRPL57Q9BQC6 102 aaKnown RBP20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 MRPL46Q9H2W6 279 aaKnown RBP20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 LATS2Q9NRM7 1088 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 PSD3Q9NYI0 1048 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 COPG2Q9UBF2 871 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 RRP9O43818 475 aaKnown RBP20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 CDK14O94921 469 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 SEMA4FO95754 770 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 FTH1P02794 183 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 CPA3P15088 417 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 TFEBP19484 476 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 CDK3Q00526 305 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 INPP5AQ14642 412 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 PCLAFQ15004 111 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 TTLL9Q3SXZ7 439 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 TECRLQ5HYJ1 363 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 ADGRG6Q86SQ4 1221 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 RDH11Q8TC12 318 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 EEF1AKMT1Q8WVE0 214 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 ASB12Q8WXK4 309 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 COX14Q96I36 57 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 OR2AG1Q9H205 316 aa20.13■□□□□ 0.81
VCPKMT-202ENST00000395860 SLC31A1O15431 190 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 SGTAO43765 313 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 ZBTB14O43829 449 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 MYL2P10916 166 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 DGKAP23743 735 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 TEAD1P28347 426 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 OXTRP30559 389 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 ALDH3A1P30838 453 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 RGS4P49798 205 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 CTSCP53634 463 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 ATP6V0D1P61421 351 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 TMEM220Q6QAJ8 160 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 TMEM151AQ8N4L1 468 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 BEND7Q8N7W2 519 aaPredicted RBP20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 ALG9Q9H6U8 611 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 WDR26Q9H7D7 661 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 ATXN10Q9UBB4 475 aa20.12■□□□□ 0.81
VCPKMT-202ENST00000395860 RAD51BO15315 384 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 VEGFDO43915 354 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 ZNF217O75362 1048 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 APBB3O95704 486 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 DCNP07585 359 aaKnown RBP20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 BGNP21810 368 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 KCNA4P22459 653 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 CCR7P32248 378 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 PRLHRP49683 370 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 SEC24CP53992 1094 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 NAPRTQ6XQN6 538 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 ISCA2Q86U28 154 aa20.11■□□□□ 0.81
VCPKMT-202ENST00000395860 TRIM42Q8IWZ5 723 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms