RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 POP7O75817 140 aaKnown RBP16.3■□□□□ 0.2
CXCL1-201ENST00000395761 RPIAP49247 311 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 MAZP56270 477 aaKnown RBP16.3■□□□□ 0.2
CXCL1-201ENST00000395761 CLDN6P56747 220 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 PRAMEP78395 509 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 SEMA3AQ14563 771 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 INSCQ1MX18 579 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 C14orf28Q4W4Y0 310 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 AFTPHQ6ULP2 937 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 RAB44Q7Z6P3 723 aaPredicted RBP16.3■□□□□ 0.2
CXCL1-201ENST00000395761 PCGF5Q86SE9 256 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 NAGSQ8N159 534 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 ARL14Q8N4G2 192 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 BBOF1Q8ND07 529 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 OR4L1Q8NH43 312 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 DCUN1D1Q96GG9 259 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 SIGLEC10Q96LC7 697 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 PWWP2AQ96N64 755 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 MRM3Q9HC36 420 aaKnown RBP16.3■□□□□ 0.2
CXCL1-201ENST00000395761 PRDM8Q9NQV8 689 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 MARCH4Q9P2E8 410 aaPredicted RBP16.3■□□□□ 0.2
CXCL1-201ENST00000395761 DMGDHQ9UI17 866 aaKnown RBP16.3■□□□□ 0.2
CXCL1-201ENST00000395761 WASF3Q9UPY6 502 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 SNX24Q9Y343 169 aa16.3■□□□□ 0.2
CXCL1-201ENST00000395761 NCOR2Q9Y618 2525 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 GOLGA4Q13439 2230 aaKnown RBP16.29■□□□□ 0.2
CXCL1-201ENST00000395761 IGLV3-16A0A075B6K0 115 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 PRR19A6NJB7 356 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 SMAPO00193 183 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 NDC80O14777 642 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 TP73O15350 636 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 HYAL3O43820 417 aaPredicted RBP16.29■□□□□ 0.2
CXCL1-201ENST00000395761 ATP1B2P14415 290 aaPredicted RBP16.29■□□□□ 0.2
CXCL1-201ENST00000395761 SPINK2P20155 84 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 ARNTP27540 789 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 PMLP29590 882 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 RPL21P46778 160 aaKnown RBP16.29■□□□□ 0.2
CXCL1-201ENST00000395761 CLCNKAP51800 687 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 SLC7A5Q01650 507 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 ILKQ13418 452 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 HLTFQ14527 1009 aaKnown RBP eCLIP16.29■□□□□ 0.2
CXCL1-201ENST00000395761 SMAD1Q15797 465 aaKnown RBP16.29■□□□□ 0.2
CXCL1-201ENST00000395761 MSS51Q4VC12 460 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 CASC4Q6P4E1 433 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 LDB1Q86U70 411 aaPredicted RBP16.29■□□□□ 0.2
CXCL1-201ENST00000395761 HOOK3Q86VS8 718 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 C17orf82Q86X59 251 aaPredicted RBP16.29■□□□□ 0.2
CXCL1-201ENST00000395761 MARCH9Q86YJ5 346 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 CLDN19Q8N6F1 224 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 FCRL3Q96P31 734 aaPredicted RBP16.29■□□□□ 0.2
CXCL1-201ENST00000395761 TIMM29Q9BSF4 260 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 OSGEPL1Q9H4B0 414 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 EVA1BQ9NVM1 165 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 WHRNQ9P202 907 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 RABGEF1Q9UJ41 708 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 PRSS21Q9Y6M0 314 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 RNF215Q9Y6U7 377 aa16.29■□□□□ 0.2
CXCL1-201ENST00000395761 A6NCN8 305 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 CFAP99D6REC4 459 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 GOLGA8KD6RF30 607 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 GOLGA8TH3BQL2 631 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 BANF1O75531 89 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 SEC31AO94979 1220 aaKnown RBP16.28■□□□□ 0.2
CXCL1-201ENST00000395761 VAPBO95292 243 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 TRIM16O95361 564 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 RALBP11234 206 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 PBLDP30039 288 aaPredicted RBP16.28■□□□□ 0.2
CXCL1-201ENST00000395761 ITGA8P53708 1063 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 MORF4L2Q15014 288 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 FASTKD1Q53R41 847 aaKnown RBP16.28■□□□□ 0.2
CXCL1-201ENST00000395761 TEX35Q5T0J7 233 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 HIBCHQ6NVY1 386 aaPredicted RBP16.28■□□□□ 0.2
CXCL1-201ENST00000395761 IYDQ6PHW0 289 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 FAM83HQ6ZRV2 1179 aaPredicted RBP16.28■□□□□ 0.2
CXCL1-201ENST00000395761 AMZ2Q86W34 360 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 HEXDCQ8WVB3 486 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 UBXN4Q92575 508 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 CCDC74AQ96AQ1 378 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 SNF8Q96H20 258 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 SGSM3Q96HU1 749 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 ZNF514Q96K75 400 aaPredicted RBP16.28■□□□□ 0.2
CXCL1-201ENST00000395761 EPB41L5Q9HCM4 733 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 SCHIP1Q9P0W5 487 aaPredicted RBP16.28■□□□□ 0.2
CXCL1-201ENST00000395761 MAD1L1Q9Y6D9 718 aa16.28■□□□□ 0.2
CXCL1-201ENST00000395761 DNMT3AQ9Y6K1 912 aaPredicted RBP16.28■□□□□ 0.2
CXCL1-201ENST00000395761 ARHGEF17Q96PE2 2063 aaPredicted RBP16.27■□□□□ 0.2
CXCL1-201ENST00000395761 FAM237BA0A1B0GVD1 139 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 MAGEB16A2A368 324 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 PPM1DO15297 605 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 CD3EAPO15446 510 aaKnown RBP16.27■□□□□ 0.2
CXCL1-201ENST00000395761 OPA1O60313 960 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 OR1I1O60431 355 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 GP1BAP07359 652 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 RHOXF2BP0C7M4 288 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 ARCN1P48444 511 aaKnown RBP16.27■□□□□ 0.2
CXCL1-201ENST00000395761 E2F1Q01094 437 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 INSM1Q01101 510 aaPredicted RBP16.27■□□□□ 0.2
CXCL1-201ENST00000395761 GUCY2DQ02846 1103 aa16.27■□□□□ 0.2
CXCL1-201ENST00000395761 DHX9Q08211 1270 aaKnown RBP16.27■□□□□ 0.2
CXCL1-201ENST00000395761 NFE2L1Q14494 772 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms