RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 IER2Q9BTL4 223 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 DERL2Q9GZP9 239 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 P2RY12Q9H244 342 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 TFB2MQ9H5Q4 396 aaKnown RBP14.96□□□□□ -0.02
SCAF11-204ENST00000395454 SYTL2Q9HCH5 934 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 TAS2R13Q9NYV9 303 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 VTI1BQ9UEU0 232 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 PKP3Q9Y446 797 aa14.96□□□□□ -0.02
SCAF11-204ENST00000395454 TRBV5-4A0A0C4DH59 114 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 FAM86C2PA6NEL3 165 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 HDAC3O15379 428 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 NDUFS3O75489 264 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 DNTTP04053 509 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 GABRG2P18507 467 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 TFEBP19484 476 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 PTGER3P43115 390 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 CCR3P51677 355 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 PTPN5P54829 565 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 RPS14P62263 151 aaKnown RBP14.95□□□□□ -0.02
SCAF11-204ENST00000395454 TTC31Q49AM3 519 aaPredicted RBP14.95□□□□□ -0.02
SCAF11-204ENST00000395454 ZSWIM9Q86XI8 627 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 TREML1Q86YW5 311 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 KIF2BQ8N4N8 673 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 TMEM105Q8N8V8 129 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 KCNJ9Q92806 393 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 RAB3IPQ96QF0 476 aaPredicted RBP14.95□□□□□ -0.02
SCAF11-204ENST00000395454 TRMOQ9BU70 441 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 COG4Q9H9E3 785 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 KLC4Q9NSK0 619 aa14.95□□□□□ -0.02
SCAF11-204ENST00000395454 CUL9Q8IWT3 2517 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 A0A1W2PQ67 120 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 F8W8V4 182 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 ADH1BP00325 375 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 ESR1P03372 595 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 ALPIP09923 528 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 ACADMP11310 421 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 PKMP14618 531 aaKnown RBP14.94□□□□□ -0.02
SCAF11-204ENST00000395454 MPSTP25325 297 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 CDKN1CP49918 316 aaPredicted RBP14.94□□□□□ -0.02
SCAF11-204ENST00000395454 PTPRRQ15256 657 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 CTSL3PQ5NE16 218 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 KIRREL3Q8IZU9 778 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 FBXL6Q8N531 539 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 ATOH8Q96SQ7 321 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 GPR63Q9BZJ6 419 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 ZFYVE1Q9HBF4 777 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 A0A1W2PP55 124 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 AGAP14A8MT82 685 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 PLK4O00444 970 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 GRID2O43424 1007 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 ZBTB14O43829 449 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 IMPDH1P20839 514 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 C5AR1P21730 350 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 RPS3P23396 243 aaKnown RBP eCLIP14.94□□□□□ -0.02
SCAF11-204ENST00000395454 ITGB7P26010 798 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 KCNC1P48547 511 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 PXNP49023 591 aaPredicted RBP14.94□□□□□ -0.02
SCAF11-204ENST00000395454 ATP6V0D1P61421 351 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 LRRC73Q5JTD7 316 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 BRAT1Q6PJG6 821 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 FRMD7Q6ZUT3 714 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 BMP8AQ7Z5Y6 402 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 MAPK15Q8TD08 544 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 GANCQ8TET4 914 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 KIAA1191Q96A73 305 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 RILPQ96NA2 401 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 TBC1D10AQ9BXI6 508 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 ARMCX1Q9P291 453 aa14.94□□□□□ -0.02
SCAF11-204ENST00000395454 PLXNB3Q9ULL4 1909 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 NEMP2A6NFY4 417 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 C16orf96A6NNT2 1141 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 H3BMM5 538 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 KERAO60938 352 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 RNASEH2AO75792 299 aaKnown RBP14.93□□□□□ -0.02
SCAF11-204ENST00000395454 SRP72O76094 671 aaKnown RBP14.93□□□□□ -0.02
SCAF11-204ENST00000395454 APBB3O95704 486 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 TSPAN12O95859 305 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 PYGLP06737 847 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 MTHFD2P13995 350 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 CTPS1P17812 591 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 XPAP23025 273 aaPredicted RBP14.93□□□□□ -0.02
SCAF11-204ENST00000395454 HNF1BP35680 557 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 PDAP1Q13442 181 aaKnown RBP14.93□□□□□ -0.02
SCAF11-204ENST00000395454 SEL1L3Q68CR1 1132 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 FBXL19Q6PCT2 694 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 PARS2Q7L3T8 475 aaKnown RBP14.93□□□□□ -0.02
SCAF11-204ENST00000395454 AADATQ8N5Z0 425 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 ARRDC3Q96B67 414 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 SCRN2Q96FV2 425 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 MAELQ96JY0 434 aaKnown RBP14.93□□□□□ -0.02
SCAF11-204ENST00000395454 MIPEPQ99797 713 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 BTBD10Q9BSF8 475 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 CCDC68Q9H2F9 335 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 ALG9Q9H6U8 611 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 BPIFA1Q9NP55 256 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 FBXL12Q9NXK8 326 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 SERGEFQ9UGK8 458 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 ZDHHC2Q9UIJ5 367 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 APPL1Q9UKG1 709 aa14.93□□□□□ -0.02
SCAF11-204ENST00000395454 PCDHB1Q9Y5F3 818 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms